Fomitiporia mediterranea: FOMMEDRAFT_109468
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Entry
FOMMEDRAFT_109468 CDS
T03132
Name
(RefSeq) YTH-domain-containing protein
KO
K20102
YTH domain-containing family protein
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_109468
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FOMMEDRAFT_109468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
18670425
NCBI-ProteinID:
XP_007267644
JGI:
Fomme1_109468
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MSNRPVSPPPIPPSSPPAAGVRRVHTISAASRAARAGSRLLPSEEVQQHQVWNDDEVVDQ
DWVGGIGAIGEKNAGLHRQSSLPTRYNRAFPRSNQNRQGGTLTPRTMNSLAAIAAEQGHE
GEEEEWENDVRQWNGDERLDAHDMSHYAHVVENQSGSSQGHSPLSPSFPPHTVSPPPAEV
NVRRNQSLTYGAAGGAPRRMAVNLRRSGTLQATMERSHAASSQSPPSPVDNEEDFQEEER
HNDDDYHYALLQQQVQQQQQQQQNQNQNVYGQSSGNYTPTSSVGRNSPWSVNNNANEWKY
GNNNNGSSAIDDVQRALSALEISGGNLAQQQNQNFANGGSGQGGLPPRLNQQQHVGQIGQ
GSGLRRTDNATGNGNGTGNGLGISIGQRGGPDKLQLVTDIDSGSIKSGPSSAGTNVPSVG
HGNGFGQQTQRSSNDPWEQKERVLASRTSNPNLQYAARGNYDASGLPPNPPVPAQYLGQQ
DPRRLGLASPVGGQNAQVQAQGGLNVGGPQHNPGFITAPLDVPSLIAAKGYNPPTFDCKP
AFARFFVIKSYTEDDVHKSLKYEIWSSTDPGNKRLDKAFKETAGRGPIYLFFSVNASGHF
CGMAEMMTPVDYTRSSTVWASDKWKGVFKVRWIFVRDIPNANLRHIKLNNTQERKPVTNS
RDTQELLPDAGQEMLRIFFTHPARTSLLQDFAFYELQSMQKMQQQTAQAQVQSPGSPPSQ
SQSPQPQLSQQHPFAMPNPYSQHLGMPGQMLPLQMNSQYAAVQSNIMRNPSPVPVNAGGQ
GYVGNF
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcgcccagtttctccaccacccattccgcccagctctccgcccgcagccggc
gtccgacgtgttcacactatatcagccgcatcccgtgctgcccgagccggctcaaggctc
ctgccgtccgaagaggtccagcaacaccaggtctggaacgacgatgaagtcgttgaccaa
gactgggtcggcggcataggtgccataggcgagaaaaacgccggtctgcatcgtcagagc
tccttgccaacgcggtacaatagggcatttccgcgcagtaatcaaaaccgtcaaggtggt
actctgacgcccagaacaatgaacagcctggccgcaatcgctgccgagcagggccatgaa
ggcgaggaagaagagtgggagaacgacgtgcgtcaatggaacggtgacgagcgtcttgat
gcacacgatatgtcgcattatgctcacgtcgtcgaaaaccagtctggttcttcacaggga
cattcaccgttgtcgccttctttccctccgcacactgtctcacctccccctgctgaagtc
aatgtaaggcgcaaccaatctctgacgtacggtgcggctggcggagcaccccgtcgcatg
gcggtgaacttgcgccgctcgggtacgcttcaagccactatggaacgatctcatgctgct
tcctctcagtcgccgcctagtccagttgataatgaagaagattttcaagaggaagagcgt
cacaacgatgatgattaccactatgcccttcttcaacaacaagtacagcagcagcaacaa
caacaacagaaccagaaccaaaacgtctacggtcaatcgtcgggcaattacacgccgact
tcatcagtgggccgtaactcaccgtggagcgtgaataataacgccaatgaatggaaatat
ggtaataataataatggttcgagtgcaatcgatgacgtgcagcgcgcgctttcggcgctc
gagatttccggtggcaatcttgctcagcagcagaaccagaacttcgcgaacggtggttcc
ggccagggtggtcttcctccccgtttgaaccaacaacaacatgttggtcagattggtcaa
gggtctggtttgcgccgtaccgataatgctactggaaatgggaacggtaccggtaatgga
cttggtataagcataggtcaacgcggaggaccggacaaattgcagctagtcacagacatt
gacagcggcagtattaagagcggaccaagcagtgccggaacgaacgtcccaagtgttgga
cacggaaacggctttggtcagcagacgcagcgtagctcgaacgacccgtgggagcagaaa
gaacgtgttcttgcttcgcgcacatctaacccgaacttgcaatacgctgcccgcggtaat
tacgatgcatcaggtctgccaccgaatccacctgttcctgcacagtatcttggtcaacag
gacccacggcgccttggactcgcttctccagtcggcgggcagaatgcgcaagttcaggct
cagggcggacttaatgtcggcgggccgcagcacaacccaggatttattactgctcctctt
gacgttccgtcgctcatcgcagcgaaaggctacaatcctcctaccttcgattgcaagcca
gctttcgcccggtttttcgtcatcaagtcttatacagaggatgacgtccataaatctctg
aagtatgagatttggagctccacggatcctggtaacaagcgcctggataaggcattcaaa
gaaacagccggtcgcggacccatctatctctttttcagtgtcaatgctagcggtcacttc
tgcggcatggcagagatgatgacgcctgtcgattacactcgcagtagtacagtctgggcg
tctgacaagtggaaaggcgtgttcaaggtccgctggatctttgtccgcgacattccgaat
gcgaacttgcgtcacattaagctcaataacacgcaagagcgcaaaccggtgacgaacagt
cgcgacacgcaagagctcctgcccgatgcagggcaagaaatgctccgtattttcttcact
catccagcgagaacatcgctcctgcaggactttgcattttatgagctgcaatccatgcag
aagatgcaacaacaaaccgcacaagcacaagtacagtctccgggttccccgccctcgcaa
tctcaatctccacagccacagctatcccagcaacatccatttgcgatgcctaatccgtac
tcacaacatctcgggatgcccggccagatgctacccctgcagatgaattcgcaatatgca
gctgttcagagcaatatcatgcgtaacccgagtcctgtacccgtcaatgccggaggccag
ggctatgttggtaacttttga
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