Fomitiporia mediterranea: FOMMEDRAFT_109756
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Entry
FOMMEDRAFT_109756 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
fme
Fomitiporia mediterranea
Pathway
fme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOMMEDRAFT_109756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_109756
Spliceosome [BR:
fme03041
]
Complex B
Other components
Prp19-related factors
FOMMEDRAFT_109756
Complex C
FOMMEDRAFT_109756
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
Torus
zf_CCCH_4
RRM_1
zf-CCCH
zf-CCCH_3
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
18670452
NCBI-ProteinID:
XP_007267821
JGI:
Fomme1_109756
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MPPKADINKAGWEQSEFPILCETCLGDNAFVRMSKQEFGRSCGTCARPFTVFRWNPGAGM
RFKTTVVCQTCAKIKNVCQTCLLDLEYGLPTQVRDAALAIKSAAPSSDINREYFAQNMDG
KLEGNKSLLDSGRAHSAGKEMLKQLARTDPYYKRNRPKVCSFFVKGDCNRGTECPYRHEM
PEDNELSKQNMQDRYHGRNDPVARKIFTEHAKTQGLEPPEDESITSLFLSSLPQNATEQS
IRTHVVQTLPPSTNPATVIRSVVYVAKSRCAFVNFTSRAAAERAAEVWSNGLEIDGVMVG
IKWGRSRAKPGASDGGSGSGTSTPSVPAASATAAASTA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaaaagcagatattaataaagctggttgggaacagagcgagtttcctattctc
tgtgaaacttgtttgggcgacaatgctttcgttcgaatgtccaaacaagaatttggacgt
tcatgcggcacctgcgctcgccccttcaccgtcttccggtggaaccctggcgcaggcatg
cgtttcaaaacaacggttgtctgtcaaacctgcgcgaaaatcaagaacgtctgccagact
tgtttactcgacttagagtatgggctaccaacgcaggttcgggatgcggcgttggcgatt
aagagcgctgcgccgagtagtgatattaatagggagtattttgcgcagaatatggatggg
aagttggaaggaaacaaatctttgcttgactccgggagagcacattcagcggggaaagag
atgttgaaacaactagcacggacggatccttattacaaacggaatcgacctaaggtatgc
tcgttcttcgtgaagggtgattgtaataggggaaccgaatgcccttatcgacatgagatg
ccagaggataacgaactgtcaaagcagaatatgcaagatcggtatcatggacggaatgac
cctgttgcgcgtaagatctttacagagcatgcgaagacgcaaggactcgaacctccggaa
gatgaatcaatcacttccctcttcctatcttccctcccgcaaaacgcaaccgaacagtcc
atccgaacacacgtcgtccaaactctccctccttccacgaacccggcaactgtgatccgc
agtgtagtgtacgtcgcaaagtcgagatgtgcatttgtgaatttcacgagtcgcgcggcg
gcggaaagggcagcagaagtatggtcgaatggattggaaattgatggtgtgatggttgga
attaagtggggaaggagtagagctaaaccaggtgcatcggacggtggtagtggtagtggg
actagtacgccttctgtacctgctgctagtgctacggctgcggcttctactgcttga
DBGET
integrated database retrieval system
