Fomitiporia mediterranea: FOMMEDRAFT_111632
Help
Entry
FOMMEDRAFT_111632 CDS
T03132
Name
(RefSeq) DEAD-domain-containing protein
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_111632
Enzymes [BR:
fme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOMMEDRAFT_111632
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
90S particles
Helicases
FOMMEDRAFT_111632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
18670599
NCBI-ProteinID:
XP_007268926
JGI:
Fomme1_111632
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MSIRSPTEVQAACIPPLLAGMDCVGNAQTGSGKTIAFALPILQKLSFDPYGIYALVLTPT
RELAFQISEQFAVLGAPLNIQTAVIVGGMDTIAQALELNNRPHVVVATPGRIVDHLKSSS
GEWDLSRVKFLVLDEADRLLTPTFAPELEYLFKILPRERQTCLFTATMTESIETLITAPP
RPGKRKPFVHRMTAKVETVETLEQFYLLVPSHVREPYLFHLLCNPPESIVHMRCTPPEPV
KPSKKAKSKSSSKTRKAEDPDAIEQPPPTMIFCARARTAAYLATLLQTLGIRSTALHSRL
TQRARLTALGLFRARVVPVLVCTDVGARGLDVDDVALVVNWDMPQEPEEYTHRVGRTARR
GRTGLAMSFVTERDEQRVIRIEERIKTNLQEMTLPEGKVLEKLNAVSTAKRLANMELHDS
DFGKREEIHKIKQAKRERVSTLRSSS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcgttccccgactgaagtgcaagcggcgtgtattcctcccctattagctggt
atggactgtgttggtaatgcgcagacgggttcagggaaaactatcgcgttcgcattacct
atcctacagaagctatctttcgatccctatggaatttatgcactggttctaacacctaca
cgagagcttgcattccagatttcggaacaatttgctgtccttggtgctcccctcaatatc
caaacggctgtgattgtcggtggcatggatacgatagcgcaagcacttgagctaaacaat
cgtccacacgttgtcgttgcaactcctgggcgaatcgttgatcatctcaagagctccagt
ggtgaatgggatttatcgcgtgttaaattcctggtgcttgatgaagccgatcgactgctt
accccgacctttgccccggaattggaatatctattcaagattcttccaagagagagacag
acctgccttttcacagcaacaatgacagagtccatagaaaccctgatcacggctcctccc
cgaccagggaaacggaagccgttcgtacatcggatgactgccaaggtagaaacggtagaa
acactcgagcaattctacctcctggttccatcacacgtccgagagccctacttattccat
ctcctctgtaatcctccagagagcatcgttcatatgcgatgcacacctccggaacccgtg
aaaccgtccaaaaaagctaaatccaagtcttcttccaagacccgtaaagccgaagacccg
gatgcaatagaacaaccccctccgacgatgatattctgtgcacgggcgcgaacagctgca
tatctcgcaacgctactacaaacacttggtattcgaagtactgcattgcattcccgcctc
acgcaacgagcgcgtctgactgcactcggtttattccgcgcacgcgttgtaccagtactc
gtatgtacagatgtcggtgcacgtggactggacgtcgacgacgtcgcactggtcgtgaac
tgggatatgccacaagagcccgaagaatacacacatcgcgtcggccgaacagcacggcgc
gggcggaccggtctcgccatgagcttcgtaacggagcgggacgaacaacgtgtgattcgg
atagaggaacgtattaagacgaatctgcaggaaatgactctgccggaagggaaagtgctc
gaaaagttgaatgctgtctccaccgctaagcggcttgcgaacatggaactgcatgattca
gacttcgggaagcgggaggagatccacaagattaagcaggcaaaaagggagcgtgtcagt
acgctaaggtcctccagctga
DBGET
integrated database retrieval system
