Fomitiporia mediterranea: FOMMEDRAFT_113318
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Entry
FOMMEDRAFT_113318 CDS
T03132
Name
(RefSeq) CPII coat sec24 protein
KO
K14007
protein transport protein SEC24
Organism
fme
Fomitiporia mediterranea
Pathway
fme04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FOMMEDRAFT_113318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_113318
Membrane trafficking [BR:
fme04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
FOMMEDRAFT_113318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
WW
HVO_2753_ZBP
Tr-sialidase_C
Motif
Other DBs
NCBI-GeneID:
18670716
NCBI-ProteinID:
XP_007270624
JGI:
Fomme1_113318
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MASPSQQLPPGWTAEWDNTHQRYLFTEAATGNRQWEVPGQQVGGVPQAAPITHSKRRQYA
AGATQAYYGPTDGYSADPGYMAAAPPVPGMTPPIGVPATAAGGGQLFTPGLAAENQFAAQ
QHQFQPQPEYINAPQAAQPTFQQQMGAVTDQLGQMGIGGQKPHALYTTNLLTAPPDPREL
ALPPPEIRLPPNACVSPSPFANADPSYQRCTINAVPTTSTLLNKSKLPFGLVLTPYRSLK
EGDPPVPLVTDTVIARCRRCRTYINPFVQFIDGGNRWRCTLCMMSNEVPQLFDWDQERNQ
PADRWARAELNHSVVEFVAPAEYMVRPPQPVFYCFLIDVSHTAISSGMVATACRTLLESL
DRIPNEDNRTKIAIIGFDVALYFFSMTPDSTDATMMVVSDLDDVYLPKPNDLLVNLTEAR
AAIEALLGRLNEMFQESHTVGSALGPAMQAGYKLISSVGGKLVVLSSSLPSLGSGVLKNR
EDPKILGTAKESSLLQPASSFYKTFAIDCSRAQVSVDMFLFSASYQDVATLACLPHYTSG
QTYFYPGFNAAKAEDAIKFAHEFGEVVAMPIMLEAVMRVRATKGLRMASFHGNFFVRSTD
LLAMPAVPQDQSYAIEIQIEENITQAFVVLQTAILHSTCNGERRIRVVTLALPTTTNLSE
VYASADQVAIATLLANKAVERSLSHKLEDARDAVVNKMVEILTTYKSSMTAAGSGASAQL
SVCENMKMLPVLLLGLLKNVGIRQSAQIPPDLRAYAQALLTSLPSQLLMPYIYPTFYSLH
NMSPEAGTMGEHGLVMPTPLPPTSERLERHGLFLIEDGQTMFLWIGRDAVPQLVQDVFDI
PSYDQLRGGKTTLPLLDNNFSQRVNAIIAKTREMRRGPYWPHLYIVKEDGEPPLRLWALS
CLVQDRADVMPSYQQFISQLKDKVNGSSY
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcatctccctctcaacagctacctcctggctggacagcggaatgggataatacgcat
cagagatacttgtttactgaggctgccacaggaaacaggcaatgggaagtccctggacag
caagttggaggtgtgccgcaggcggctcctataactcattcaaaacgaaggcaatatgct
gctggtgcaactcaggcatactatggtcccacagatggatatagtgctgacccagggtac
atggctgccgcacctccagtgcctggtatgaccccgcctataggtgttccggccactgct
gcaggtggtggtcaactcttcactcctggtctggctgcagaaaatcaattcgcagctcag
caacaccagttccaacctcagccggaatacataaatgcgccgcaggcagcccagccaaca
ttccagcaacagatgggtgcagtcacagatcagcttggacaaatgggtattggtggacag
aaaccacacgcgctttacactacaaacttgctcaccgcacctccggacccacgcgaattg
gccctcccgcctccggagatccgtcttcctcctaacgcctgtgtctccccttctccgttc
gcaaacgcggatccatcatatcaacgttgtacaataaatgcggtgcctacgacgtctact
ctacttaacaaatccaaattgcccttcggcttggttttgacgccataccgttcgttaaaa
gagggcgacccgcctgtcccactggtaacagataccgtcatcgctcgatgccgtcgttgc
aggacatatattaacccttttgtacaattcattgatggagggaaccgctggcgttgcacc
ctctgtatgatgtccaacgaggttccgcaactatttgactgggatcaagaacggaatcaa
cccgccgatagatgggctcgcgcggagttgaaccactcggttgtcgagttcgtcgcccca
gcagagtacatggttcgaccaccccaacctgttttctattgcttccttatcgacgtaagc
catactgctatctcgtcgggtatggttgcaactgcctgtcggacgttgctcgagtcattg
gacaggattccaaatgaagacaataggacgaagattgcgattatcggatttgatgttgca
ttatactttttctctatgacgcctgattccaccgatgcaactatgatggttgtttcggat
ttagacgacgtctatctgccgaaacctaatgatcttcttgtaaaccttaccgaagctcgc
gctgcaattgaggcactcctcggtcgcttgaacgagatgttccaggaatcccacaccgtc
ggaagtgccttgggccctgctatgcaagccggatacaagttgatatcgtctgttggcgga
aagcttgtggtcttatcttcgagtctaccaagtttaggctcgggtgtgttgaaaaataga
gaagaccctaaaattctcggaacggcaaaggaatcgagcttattgcagcctgcatcttcg
ttctataagacttttgctatcgactgctcacgcgcacaggtctctgtagacatgttcctt
ttcagcgcctcgtatcaggacgttgcaaccttggcgtgtttaccgcattacacgtctggt
cagacttacttctatcctgggtttaacgctgcgaaagcagaggatgcaattaagtttgcg
catgagttcggagaggtagttgctatgcccatcatgctcgaagcagtcatgcgcgtacgt
gctacaaaaggcttgcgcatggcgtccttccacggtaacttcttcgttcggtcaaccgac
cttctcgccatgccagcagtaccacaagaccagtcttatgctattgagatccagatcgag
gaaaacattacgcaggcattcgttgttcttcagactgccattcttcatagtacctgcaat
ggtgaacggagaattcgcgtcgtcacgcttgccttaccgacaacgactaacttgtccgaa
gtgtacgcctccgcggatcaagttgcaattgcaaccttattggcaaacaaggcggttgag
cgttctctgtcacacaagctggaagatgcgcgcgacgctgtcgtaaataagatggtcgaa
attctcactacgtacaagagtagcatgactgctgcgggctctggtgcgagtgcacagctt
tctgtttgcgaaaacatgaagatgcttcctgttctattgcttggcctgttgaaaaacgtc
ggaattcgtcaaagcgcgcaaattcctccagatctccgagcatatgcgcaagccttgttg
acttctctaccatctcagttactaatgccctacatctacccgacattctactctttgcat
aatatgtcacctgaggccgggacgatgggcgagcacggtctcgttatgccaacaccgctc
cctccaacctcagagcgccttgaacgccatggtctgttcttaatagaagacggccagaca
atgttcctctggattggacgtgacgctgtcccgcaactcgtacaagacgtgttcgacatt
ccttcatatgatcaactccgaggcgggaagacgacattaccactcctggacaacaacttc
tctcaacgcgtgaatgctatcatcgccaagacgcgtgaaatgcgacgcggaccctactgg
ccgcacttatacatcgtgaaagaggacggtgagccgcccttgcgactttgggcactgagc
tgtctcgtacaagaccgagcggacgtcatgccgagttatcaacagtttatctcgcagttg
aaggacaaggtgaatggttcgagctactaa
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