Fomitiporia mediterranea: FOMMEDRAFT_113347
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Entry
FOMMEDRAFT_113347 CDS
T03132
Name
(RefSeq) RBP11-like subunits of RNA polymerase
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
fme
Fomitiporia mediterranea
Pathway
fme03020
RNA polymerase
fme03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOMMEDRAFT_113347
09124 Replication and repair
03420 Nucleotide excision repair
FOMMEDRAFT_113347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fme03021
]
FOMMEDRAFT_113347
03400 DNA repair and recombination proteins [BR:
fme03400
]
FOMMEDRAFT_113347
Transcription machinery [BR:
fme03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
FOMMEDRAFT_113347
DNA repair and recombination proteins [BR:
fme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
FOMMEDRAFT_113347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Rio2_N
DUF4858
Motif
Other DBs
NCBI-GeneID:
18670721
NCBI-ProteinID:
XP_007270637
JGI:
Fomme1_113347
LinkDB
All DBs
Position
Unknown
AA seq
171 aa
AA seq
DB search
MNAIQRHELYVLEEGEEWVMVTEDTKIPNAATIKIRKQDHTLGNMLRHQLLANQSVLFAG
YRVPHPLQPYFLLKIQTDGTITPSQALEKASTDLIGTLTTLETKFRREFQYRDLERADNA
TAAATVGGGVGGLGMGGGVGGGGGDVGMDASGGVYGEGTAWSSNAYLDIDG
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctatccaacgacacgaactttatgtactcgaggagggcgaagaatgggtaatg
gttacagaggacaccaagatccccaacgcagcaacgataaaaatccgtaaacaggatcat
acactcgggaacatgctcaggcatcaactcctagcaaaccaatcagtcctcttcgcaggc
tacagagtcccacaccctctccaaccctacttcctccttaaaatccaaacagatggtacg
atcacaccaagtcaagctctcgaaaaggcttcaacggatttgattggtacgcttactacg
cttgagacgaagttccgtagggagtttcagtatcgtgatttggagagggcggataacgct
actgctgctgctactgttggtggtggtgtgggtggattaggaatgggtggtggtgttggt
ggagggggaggggacgtggggatggatgcgagcggtggtgtgtatggagaggggactgct
tggtcgagtaatgcgtatttggatattgatggttga
DBGET
integrated database retrieval system
