Fomitiporia mediterranea: FOMMEDRAFT_114738
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Entry
FOMMEDRAFT_114738 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
fme
Fomitiporia mediterranea
Pathway
fme04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
FOMMEDRAFT_114738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_114738
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
FOMMEDRAFT_114738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
HEAT
HEAT_2
Motif
Other DBs
NCBI-GeneID:
18670826
NCBI-ProteinID:
XP_007271787
JGI:
Fomme1_114738
LinkDB
All DBs
Position
Unknown
AA seq
1956 aa
AA seq
DB search
MYNQKRDMSDHQSIDSRATHKGGQFHQTQQLLGVYPFASATPTTHVARHLSNLSITAAPP
SYIQPAYYSTPSNYGNAPMYQSEFAQLSAMNVPHTGPERTYWDATRSDAFRLMEDQSSTS
YYPCPPSHWNESSAYSSYQPAPFAQSVMQHAVPYNVYPTPPPAQVPMNFSSASSSLANAL
GSPTTNRRTSSESKKQLPASQSNSTDSARFFNNFLNDQVKELPKAVQQRNARMDSRPSTP
IKQASNPDRLRMDSVPPSSPLTSLPDSQSSPRKRKIVEVLIDTPSKRPSTSSHMGPSQAI
QPTTSEFNSAKVNRQIEITPSRTPKMQVYVEITPTSKGYVTPSRSRINENPPSSDLGGYG
MDYEDRDGRNKDAMSGARSTGKRTGYRDDRVPLEKFLNLLEDIFEAEDNISGDVDTDSLP
GTFFSQLSTDPARPLLHSTIIVRLTKAISKVARPTKRIRLASVQWEGTAPGSPRKAGGMA
EVEVATLIRLLKLLERSVRAGEDLDPFQLATVKRMSTSIERTDAQTKAERAGSSKNEARN
EDVNMQTDLDKESTDMTSEDFSKLATLLETVRDSILAADCCIALLTSDRLAKQLFSEDLI
SSCLSAIKNALTNVIYPFVEAPSSDARDLSALLMHVTGRVSGGAGPFNVADHRRLIGQIF
QTMSAVFPRITNLICADGLSMPESLIIPAVYIAIGPFFVVEGGTDSDNKSKKNTVVAVIT
NTLGASGMRGLRLEALSLVRSIFAYHEDQRSWIIEEILTSLIKLSDSKQKAGIFRLRDGR
SIRTVSALLLQLVQTSAHSIRVEAFRLAKSRQQHLALKRHDSHGSAPQEPFMDQIDIEEA
KLYAGGLEAPTKSAKAIVAFLTQRSGRGKSTKNANEVEYRAILDNLISDLLLVLFWPEWP
AASLLLSIVCKYMISSLEDVKSSGNDNNASKAMALDHLGTIAGRLRSNAQKWSKESDGGD
QNAGTACLKSLDESISTLDKNALKRLISVHQEVSSHLSKRASEDHGYESARELNAVIWGQ
ELATALIQLNDSLSSSHEEDWDSNMRIKYLSIGSKAKSALRDIWKDAPTDVFDNATQDEI
DRADRLSRQLGTTQSLKNAFDPILNVVVMALDAPPVFVRTKALRALSHILSVDSTVLSNP
NVRHAIESHLLDSSPQVRDAAVELIGKYMIDSPAVAGDYYHRVAERIADTGLGVRKRVIK
LLKAFFYVTDDLDRKVDTCSKLVLRMLDEDDTVKDLAVKTLEEIWFLPTATSGQTDRGAT
LGIVSVIMGVCNIFKDRQAPLEDMLGRIVSGKEGADASAMSTLRSRFTEIYDVMIEGLVD
ASDFVNFSVTNCIRTIHLFTVAYPPVMTGSKASVLLPYLKNSTSSEEVAASDYILKIYRI
SIPHMPKASMKFGQELQAILQPMVLKPNLHGTSLQEVVACLCAVVRHLTHDFTRLVALLK
SCIARVRQYITKPGNTLDANGVRTLHILVLIVSLLGEHFDFDQLRTENTDLSGQLDAIDK
GPIVEHIYRCLLQLYEKYTEGGIRGRLLVCLGFLFRARPTLMTLESSATMMDAIFASSEE
DNRGRLLRLMQEFLVSESAKHSAQQGGPSKPSESINMDELVGNTHGFAESGVSSAIVQRY
LSHILEAAFSPVPQVQTSAVDILSFTVKQGLAHPLLSFPVIVALETSPVNSLSSRAVALH
TILHHKHTSLLNSGFVAACRKSFNYQKKLAAADNGNHELRGYRMQPTPTALLGRWYALVR
EKRATRQEFLRAVLKVFEQRDFSKTEEDTVNFVRYMAENFATFDYRTQEEVLTVLKTLTR
ELAESGSLLVERIAPGNLLAQLQSAPRTQEGMENQVQPPEGASSTSQGLSSLPFDEQLAL
MRSTCIAGIIMLLKAHLKVLYGLSEEKCQKFVLGKKSAVGDRPAARRKETVISWDRMPYA
VKPIRTHEDVELQKATFLQIWNEDGATAEPDGEEWE
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaccagaaacgcgatatgtctgatcaccagagtattgattctagagccacccat
aagggtggccagtttcatcagactcagcagttactcggcgtgtatccattcgcgtctgca
acgcccactactcatgtggctcgccacttaagtaacttgtctattaccgctgcaccaccg
tcgtacattcagccagcgtattactcgacaccatcaaactatggaaatgcaccaatgtac
cagagcgagtttgcgcagctttcggcgatgaacgtacctcacaccggtcctgagcggact
tattgggatgcaactcggagtgatgcgtttcggttaatggaagaccagtcttcaacgagt
tattatccatgtccaccttcccattggaacgaatcatctgcatattcctcttatcagcca
gctccatttgcacaatctgtcatgcaacacgcggttccatataacgtgtacccaaccccg
cctcctgcccaagttcccatgaatttctcatcagcgtcgtcctcgttagcgaatgctctt
gggtctccgacaaccaaccgtcgaacgtccagtgaaagcaagaagcaactaccggcttcc
cagagcaactcgacggattcagcacgatttttcaataatttcttgaatgaccaggtcaag
gagctcccaaaagctgttcagcagagaaatgcgcggatggactcgcgcccttcgacgcca
atcaaacaagcatcaaacccagaccggttgcgcatggatagtgtaccaccatccagcccg
ctcacttctttacctgattcacaaagttctccgaggaaacggaagattgtagaggttctc
attgatacaccaagtaaacgcccatcaacaagctcacacatgggaccatcacaagctata
cagcctaccacctctgaatttaattctgcaaaggttaatagacagatagaaattacgcca
agccgtacaccgaaaatgcaggtctacgtcgaaatcacgcctacttcgaaaggttatgtt
actccatcgaggtcacgtataaatgagaatccgccgagctctgaccttggtggatatggc
atggactacgaggatagggatggtcgtaataaggacgcaatgagcggtgctcgctcaaca
gggaaaaggactggatatagggatgaccgagtgccgctcgaaaaattccttaacctctta
gaagacattttcgaggcggaagataatatttctggggatgttgataccgattctttgcct
ggaacctttttctcgcagctcagcactgatccagccaggccgcttcttcattcgaccatt
atagtccgactgaccaaagcaataagcaaagttgctcgacccacgaaacgaatacgactc
gcgtcagttcagtgggagggaaccgctccaggaagtcctcgcaaagctggtggaatggcc
gaagtcgaagttgcaactctcattcgtttgctcaagctcctggaaaggagcgtccgagcg
ggtgaagacttggatccttttcaactggcgacggtgaagagaatgtctacttcaatcgaa
aggacagatgcgcaaacaaaagcagaaagagcgggctcgtcaaagaacgaggctaggaat
gaggacgtcaatatgcaaacagacttggacaaggaatccacagatatgacaagcgaagac
ttttccaagcttgcaaccctgcttgagaccgtccgcgatagcattctagctgcagactgt
tgtattgccttgctcacgagcgatcgacttgcaaaacagttattctccgaagaccttatt
tcatcatgcttgtcagcaatcaagaatgcattgacgaatgtcatttatccctttgtcgaa
gccccgtcatctgacgcacgcgatctctcagcccttctcatgcacgttacgggtcgagtc
tctggtggcgcagggcctttcaatgttgcagaccaccggcgtctaatcggacagattttc
caaacgatgtctgcggttttcccccgcattactaatctcatctgcgccgatggtctttcc
atgcccgagtcgctgataattccggccgtttatattgccatcggaccgttcttcgtcgtt
gaaggtggtactgattctgataataaatccaagaagaatactgtagttgcggtcatcaca
aataccctgggggccagtggaatgcgtggtcttcggttggaggctctttcccttgtacga
agtatatttgcctaccatgaagaccagcgatcttggataattgaggagattctgacatcg
ttaatcaagttatccgactctaagcaaaaggcagggatattccgattgcgagatggtcga
tccatacgaacagtctctgctttgcttctacaactcgtccaaacatcagcacatagcatc
cgcgttgaggcgttccgtttagcaaagtcacgtcaacagcatcttgcgttgaaacgccat
gacagccacggttctgcccctcaagagccgtttatggatcaaatagacattgaggaagca
aaattgtacgctggtggcctggaagcgccgacaaaatctgccaaggcgatcgttgcgttt
cttacacaaaggtccggacgtggcaaatcgacgaagaacgcgaacgaagtggaataccgt
gctattctggacaacctaatatctgaccttctgctcgtcctcttctggccggaatggcca
gcagcgagcctattgctgagcatagtctgcaaatatatgatctcgtcgctggaagacgtg
aaatcctccggcaatgataataatgcttcgaaggcgatggccctcgaccacctgggtaca
attgcgggcagactacgaagcaacgcgcaaaaatggtccaaagagagcgacggcggggac
cagaacgctgggacggcatgtctcaagagccttgacgaatccatttcaacacttgataag
aatgccctgaaaaggcttataagcgtacaccaagaagtatcttctcatttgtcaaagcgt
gcatctgaggatcacggttatgagagtgctcgagaactgaacgcggtgatttggggacaa
gaacttgcaactgctttgatccagttgaacgactctttgtcaagctcgcatgaagaagat
tgggattcaaatatgaggatcaaatatctatcgattggcagtaaagcgaagtccgctctt
cgagatatctggaaagatgcaccgacggacgtatttgacaacgcgacgcaggacgagata
gacagagctgataggctctcccgacaactgggaacgacacaatctttgaagaacgcgttt
gaccccattctgaatgtggtagtcatggctttagatgcacccccagtttttgtccgaacg
aaggcattacgtgcactgagtcatattttgtcagtcgattcgacggtgctctcaaacccg
aacgttcgtcatgccatcgaaagccacctcttggacagttcaccgcaggttcgagacgcg
gctgtagagctgattgggaagtatatgatagattctcctgctgtagcaggagattactat
catagagttgccgaacgtatagcggatactggactaggtgtacgcaagagggtgataaag
ctactaaaagcattcttctacgttaccgatgacttagaccggaaagtcgatacttgttct
aaattagtccttcggatgctagacgaagatgacactgtcaaggatttggctgtcaagact
ttggaggagatttggttcttgccaacggcaacatccggccagacagacaggggtgcaact
ctcggaattgtttctgtgataatgggtgtttgtaatattttcaaagaccgccaagcaccg
ttggaagacatgcttggcagaattgtctctggaaaggaaggggctgacgcttctgcaatg
tcgacacttcgttctcgcttcacggagatttatgatgttatgattgagggtcttgttgac
gcttctgacttcgtcaatttttccgtcacgaactgcatccgcacaattcatttgtttact
gtagcatatccacctgtcatgactggttccaaagcatctgttttgctaccttacctgaag
aattcaacctcgagcgaagaagttgctgcttccgactacattctaaagatatatcgtata
tcaattccgcatatgcctaaggcttccatgaagttcggacaggaactgcaagccatactc
caacctatggtgctcaagccgaatctccatgggacatcactgcaagaagttgtagcatgc
ctatgcgcggtggtacgacatctaacccacgacttcacccgccttgtcgctttgttgaag
tcttgtatcgcgagagtacgacaatacattacgaaacctggtaacaccctcgatgccaat
ggtgttcggactcttcatattttggtcctaattgtctctcttcttggtgaacatttcgat
ttcgaccaactaaggacagaaaacacagatttgtctggccaattagacgccatagataag
gggcccatcgttgaacatatctacaggtgccttctgcagctgtatgagaaatacactgag
gggggtatccgcgggaggttgcttgtctgcttgggcttcctgttccgagctcggccgact
ttaatgacccttgaaagctcagcgacaatgatggacgctatatttgcgtcatctgaggaa
gacaaccgtgggcggttgctcaggctgatgcaggaatttttggtctccgagagtgctaag
cattccgcacagcaaggcggtcctagtaagccgagcgaaagcataaatatggacgaactg
gtaggaaatactcacggcttcgccgaatctggcgtcagctcggctatagtgcagcgttac
ctcagtcacattcttgaggcggcattttcgcctgtcccgcaagtccagacgtcagctgtg
gacattttgagtttcaccgtcaagcagggtctcgcccatccgcttttgtctttccccgtt
atcgttgctctggagacctccccagtgaactcactgagctcgcgtgctgtcgcattgcat
acaattttgcatcacaagcatacttcattgcttaactcgggttttgtcgctgcttgtcgg
aagtctttcaactaccaaaagaagcttgctgccgccgataacggtaatcatgaattacgg
ggataccgcatgcagccgacaccgaccgcattgctcgggcgatggtacgctctagttcga
gaaaagcgagcgactcggcaagagtttctacgtgccgtcctcaaggtgttcgagcaacgt
gattttagtaaaaccgaagaggatacggtgaactttgtccggtacatggcggagaacttt
gcgacatttgattatcggacgcaggaagaggtgttgactgtactgaagacgttgacacgg
gaacttgccgaatcaggatcgcttttagttgagcgtattgcgccgggaaacttgctggct
cagttgcaatcagcaccgcgaactcaagaggggatggaaaatcaggttcagcctccagag
ggtgcatcatcaacaagccaagggctctcttctctgccctttgatgagcaactcgcgtta
atgagatcaacgtgcatagctggtataatcatgctattaaaagcacatctgaaggttctg
tatggcttatcggaggagaagtgtcagaagtttgttcttgggaagaaaagtgcagttggg
gaccgacctgctgctcgtcgaaaggagactgtgatttcttgggatcgaatgccgtatgcc
gtgaagccgatacggactcatgaggatgtggaattgcaaaaggcgacgttccttcaaata
tggaacgaagacggggcaactgctgaaccagacggcgaagaatgggaatga
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integrated database retrieval system