Fomitiporia mediterranea: FOMMEDRAFT_115432
Help
Entry
FOMMEDRAFT_115432 CDS
T03132
Name
(RefSeq) TFP11-domain-containing protein
KO
K13103
tuftelin-interacting protein 11
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_115432
Spliceosome [BR:
fme03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
FOMMEDRAFT_115432
Other components
Complex C specific factors
FOMMEDRAFT_115432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
18670876
NCBI-ProteinID:
XP_007261218
JGI:
Fomme1_115432
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MARRKRHLDEGNDSDSSVGSDDDDINDFGLNENPDERAERELFEQPYGRKKRRKANGKDD
ATYGIFGEDSEDEGFGGRGKKPVKRSDWTKAPAFISGEKKVDISEENEKAQTEPESEPEQ
EPEIQEVSMSDSNGDESEAASPPASPRVRLEDDEAEMDIAPRIGGIGSKHMAEGGTSTPS
FSSSGIGFGTGGFGISKGGIGSNKGGIGSSSRAEPVVGDARSSLPSAFGASRPQRSFVRD
GSGSAPGTRPSTPLNAAEQVHFTKLSGTFGAKMLSKMGWQAGQGLGTEGQGIVAPVESKL
RPKGMGIAFKGFKEKTEQSKAEARRRGEAVSEDEEEISKKHRKKGKAKDQVPREDAWRKP
RKSKIKVEHKTYEEIIAEAGGEPPPTGIGKIIDATGAELREVSSLADVSIASWTPSTDPM
RLPEVRHNLRLITEACKVDLDGLAREAKALEERKKWIQAEDPRLRKKIEGEAELIRRLQA
VHLVVDDISTKAKEADLSDYEPSLDVFSAVVEKLISEFSKEYDRYRLDEVVVGAIVPTFR
RMMASWRPLDEPTAFTSTLRRWRQAFKMTVVQPEADMQVDVYGTQRVSPRPLQVDVPMTP
YESLLWNIWLPRIRSTVNNDWSPSHPAALVKLYEAWSDVLPLFIKDNILDQLILPKVSSA
ISNWSPRRSEISLQAIVFPWLPHVGLRMEMFVDDARRKVKSMLRSWTPSEGVPKDFLPWK
EIFNAKDWEDMLLKYVVPKLGALLRDEFRINPRNQDMEPLKNVLAWSSILRSSITGQLLE
TEFFPKWLDVLYIWLIQPSVNFEEVAQWYQFWKTTFPEDVRSISAVEGGFTRGLQMINHA
LELGPEAPTKLPKPDHTRRPDTDSKPSMPKDKKDTATARVRPARAQEITFREIVEEFVTS
HNLLFMPAGKVHEKSRMPLFRVSKSVDGKGGLLVYLLDDAVWAPGVDGEETRAITLEDMV
LRAAKGR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaagaaaacgacatctggatgagggtaatgactcggactcgtctgtcggctca
gatgacgacgacattaatgacttcgggttgaacgagaatcccgatgagcgcgccgaacgc
gaactctttgaacagccgtacggtcgcaagaaacgcaggaaagccaatggcaaagatgat
gcgacatacgggattttcggagaagacagcgaggatgagggctttggtggccggggaaag
aagccagtgaaacgtagcgactggacaaaagctcctgccttcatctcaggtgagaagaag
gttgatattagcgaagagaatgagaaggcccagactgagcccgagagcgaacccgagcag
gaacccgaaatccaggaggtcagtatgagtgatagcaatggcgatgaaagcgaggcggcc
tcaccgccagcatctccacgtgtccgactggaagatgacgaagcggaaatggatattgct
ccccgaattggtggaatcggctctaagcatatggctgaaggtggcacatcaactccatcg
ttctcatcttcaggcatcggatttggaactggtggatttggaataagtaaaggtgggatt
gggtccaataagggcggaatcggttcatcaagtcgtgcagaacctgtggtcggcgatgct
cgctcgagtctaccttcggcattcggtgcttctcgacctcaacgctcgtttgttcgtgat
ggatctggttccgcacctggtacgagaccgtctactccgctcaatgccgcagaacaggtg
cactttaccaagctctctggcacatttggagcgaagatgttgtctaaaatgggttggcaa
gcgggtcagggtctcggtacagaggggcaaggtattgtagcgcccgtcgaatcgaaacta
cgcccgaaaggcatgggtattgcattcaaaggcttcaaagagaagacggaacagagtaag
gcggaggctcgcagacgaggagaggcggtgagcgaagacgaagaagaaatctccaagaaa
caccgcaagaagggtaaagcaaaggatcaggtaccaagagaagatgcatggaggaaacct
aggaaatccaagattaaagtcgagcataagacgtacgaagagattattgctgaagctggt
ggagaacctccacccacaggtattgggaagatcatagatgccactggtgcagagcttcga
gaggtgtcatctctggcagatgtctcaattgcatcttggacgccatctacggatcctatg
cgactacctgaagtacgacataatttgcggcttatcaccgaagcttgcaaggtcgacttg
gacggtctcgctcgagaagcgaaggctcttgaagagcgtaaaaagtggattcaggcagag
gacccaaggctgagaaagaagatcgagggcgaagcagagcttattcgcagactccaggct
gtccacctcgttgtagatgatatttctaccaaagcaaaagaagcggatctgtcggactac
gaaccttcactcgatgtattctctgcggtcgttgaaaagctcatttccgaattctcgaag
gagtatgatcgttatcgcctcgacgaggtggtcgttggtgctattgttcctacgtttcga
cgaatgatggcttcctggagacccttggacgaaccgactgctttcacttcgacacttcgt
agatggaggcaggccttcaagatgacagttgtccagcctgaagctgatatgcaagttgac
gtgtacggcacacagagagtttctccaaggccacttcaagtagacgtgcctatgacgcca
tatgagagcttattatggaacatttggctacctaggatccggtcaacagtcaataacgat
tggtcaccatctcatccagcagcactggtcaaactatacgaggcctggtcggatgtcctt
cctttatttatcaaagataacatattggaccaactcatcctgcctaaagtttcctccgcg
atatcgaattggagcccaaggcgaagcgaaatatcgttgcaagcgatcgtctttccgtgg
ttgcctcatgtcggattgcggatggagatgtttgttgacgatgcaaggaggaaagttaag
agcatgttgcgtagctggactccaagcgaaggtgttccgaaagatttcttgccatggaaa
gagatcttcaacgcgaaagactgggaggatatgctcctcaaatatgtcgttccaaagctc
ggtgctcttctacgggacgaattccgaataaacccacgcaaccaagatatggagccactc
aagaacgtacttgcttggtccagcatcttacgatcaagtattaccggacaactactcgag
acggaattcttcccaaaatggctcgacgtactgtacatctggctcattcagccaagtgta
aacttcgaggaagtcgcacagtggtatcaattctggaagactacgttccctgaggacgtg
cgctctatatctgcagttgaaggcggatttacgcgcgggctgcaaatgattaaccatgcg
cttgagctaggaccagaagcgcctacgaaactaccaaaacccgatcatacacgccgtcca
gatacggatagcaagccaagcatgccgaaggacaagaaagacacagcgacggcgcgtgta
cgtccagcccgagcacaggaaatcacgttccgcgaaatcgttgaggagtttgtcacgtcg
cacaacctattattcatgcctgcgggcaaagtacacgaaaagtcgcgtatgccactattc
cgcgtgtcaaagagtgtggatgggaagggtggtttacttgtatatcttttggatgacgcg
gtgtgggcacctggagtcgatggggaggagactagagccatcacgttagaagatatggtt
ctgagggcggcgaaagggagatga
DBGET
integrated database retrieval system
