Fomitiporia mediterranea: FOMMEDRAFT_116634
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Entry
FOMMEDRAFT_116634 CDS
T03132
Name
(RefSeq) IkappaB kinase complex, IKAP component
KO
K11373
elongator complex protein 1
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fme03016
]
FOMMEDRAFT_116634
Transfer RNA biogenesis [BR:
fme03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
FOMMEDRAFT_116634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IKI3
Motif
Other DBs
NCBI-GeneID:
18670924
NCBI-ProteinID:
XP_007262123
JGI:
Fomme1_116634
LinkDB
All DBs
Position
Unknown
AA seq
1311 aa
AA seq
DB search
MRSLSIASTHFWDVPSSNVSSSGFDVEHNCAYVLSEKEDEAEILRIEHSTSVEDIPVPIA
SFPLNGRVVSARYLNEAQSLAIITKGGDIGLLSVEEESNNFEVIGSIEAGISTAGWCPDE
SIVVVVTGDEKVLVMTTNFDVLLEQPLHSDDPGEAQQVNVGWGSKQTQFHGSLGKAAAQA
TPVSLANIGSSPDDDGLSRVSWRGDGAFFVISALRTPPQGSIDRTRRVLRVYDRQGVLQN
VAEPVAGLEHVLDWRPSGNLISGTQRFGFEGGGAGREGRHDIVFFERNGLRHGEFSLREQ
GSYKVRELMWNAESDILAVWLERDEGDIVQLWTTSNYHWCALYSLAFDGPNLPHRYLKQE
IIAPKADNGSGTFTSVTWHPENGTRLLLTTRQRVLEYVFAWETFISRAQVPNDTGSVAVV
DGTSLLITPFRTQNVPPPMASITLALGQPRTPVHVSFSPTGDHLAVLNHGGSVSLWDLRT
RMEFGRGKALDPVLVCIFDLGSEVCQPRQICLQENPAAPKTFRISVLACESIADVAFVAV
VADKVFQGQKEIEMPGKDGRLVYSTAGIYWQSSEGKIFSVSTSGEGAALVTEFPNFCFTA
EAVSLPESSSLFIGRTDSGKLYCTSPNANSPYFLAPNSSSMAISAGFVIYTTTSHESFFA
PLENLHVITSTAVMNGSSDASTQPQSQWEHRRVERGSRIVTAVPSNMSLVLQMPRGNLET
INPRPMVLVVVKQDIETKNYRKAFLACRKHRIDLSILVEHDPTAFLENVSSFVEQIDDVD
YLNLFLTGLGQTSLDSMKITEYYDALRVELESRDLTKYVNSILTVYVVKKPADYEAALSL
LLRIREIDSELVEEAVKYVIFLVDADRLFDTALGMYDFSLVLLIAQHSQRDPREYLPFLR
ELRALPKFYQRYRIDDQLKRNPKALENLNLAGPDYFDEAILYIEKHRLYTSAFQLWKNDV
ERHRRILDVYGDYLFERREFRQAAIVFIEARSSSKALVAYERALLWREALELAIRVGTDE
TSLNELAHRLADELLSKKKFEEAARLLLDHAKNLRLCINALVQGNMFSEARRIVALHGEQ
TLLEEIVQPALLDSRTQFSEDIEEMRTQLRKQTERLRELRVKKTEEPDAFYGLDDDPTLH
SVDVMTDVSMAPTAFTRYTVAPTTASKASKRTSRSKRKMERKVGSGRKGTIDEEEYLLRS
IGKLVVRFDEVQNDAAQILPHLLQFSPEHRNEAHSLQSELSVFRAELQVVLNEAWPAKNG
NATDGTGETNSSSWAERMEEKKRERTRAVESVVKPEMGVNDMSWKVDILHV
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcctttctattgcatctacgcatttctgggacgtaccttcctcaaatgttagc
tcttcgggcttcgacgttgaacataactgcgcatatgtcctatccgagaaagaggatgaa
gcagagatccttcggattgagcattcaacttctgtagaggatatcccagttccgattgcc
agtttccctctcaatggaagagtggtatccgctagatacttgaacgaagcacaatctcta
gcgatcataactaaaggaggggacattggattgttatctgttgaggaagagtcaaacaac
tttgaagttattggttctatcgaagcaggaattagtacagctggctggtgtcctgacgaa
tcaatcgtagttgtcgtgactggtgacgaaaaggtgttggttatgacaactaatttcgat
gtcctccttgagcaaccacttcactcagacgacccgggagaggctcagcaggtcaatgtc
ggttggggctctaaacagacgcagtttcacggttcgctcggaaaggccgcggcacaagct
actcctgtttcgcttgcaaatataggtagtagcccggatgacgatggtctctcgcgtgta
tcatggcgcggagacggtgccttcttcgtcatttctgcgctccgaacgccacctcaggga
tcgatcgatcgaacgcgtcgtgtgcttcgtgtatatgaccgtcaaggagttttgcaaaat
gttgcggaacctgttgctgggcttgaacatgtattggactggcgacctagcgggaacctc
atttctggaacgcagcgtttcggatttgagggaggcggtgctgggagagaaggtcgacat
gacattgtgttcttcgagcgaaacggactgagacacggagagttctcgttaagggagcaa
ggaagctataaagtgcgtgaattgatgtggaatgccgaatcagacatccttgctgtgtgg
ctcgaacgagacgaaggcgacattgtgcagctttggaccactagcaattatcattggtgc
gcactctacagtttggcctttgacggacctaacctgcctcataggtatctaaagcaggag
atcatcgctccaaaagccgacaatggatccggaacgtttacttcagtcacttggcatccc
gaaaacggcacgcgtcttctcctcacgacacgtcaacgagttctggaatatgttttcgct
tgggaaacgttcatctcacgagcacaggtgccaaatgacactgggtcggtagctgttgtc
gacggaacatctctattaataacgcccttccgaactcaaaacgtcccgcctcctatggcc
tccattactctagcactaggccagccgcgcacgcctgtgcatgtttccttctccccaaca
ggcgaccatcttgcggtcttgaaccacggcggatccgtctcactatgggatctgcgtaca
cgtatggaatttggtcgtggaaaggctcttgacccagttcttgtgtgcatattcgatcta
gggtcggaggtttgccagccgaggcaaatatgtcttcaagagaatcctgctgcaccgaag
acgttccggatctctgtcctagcatgtgaatctattgcggacgtagcctttgtagctgta
gttgcggataaagttttccagggacaaaaggagattgaaatgccaggtaaagacgggcgg
ttggtatattcgacagctggaatctattggcagtcgtcggaaggaaaaatcttctccgtt
tctacatcaggggaaggtgctgcgctcgtaactgagtttccgaatttctgcttcaccgcg
gaagccgtgtcgctacccgaaagctcttctctgttcattggccggacagattctggaaaa
ctctactgcacgtctccgaacgcaaactccccgtatttccttgcgccaaacagctcgtcc
atggctatatctgctgggtttgtcatatacaccacgacatcgcacgagtctttctttgca
ccgctcgagaatctgcatgttattacaagtactgcggtgatgaatggatcgtcagacgcc
tcaactcaaccacagtcccaatgggaacaccgtcgtgtcgagcgtggttcgcgtatcgtt
acagctgtgccgagtaatatgagccttgtgctccagatgccacgaggaaatctggaaacg
atcaatccgcgaccaatggttctcgttgtggtgaagcaggacattgaaacaaagaactac
cggaaggctttcctggcgtgtcgaaagcacagaatcgatctgtctatcttggttgagcat
gatccaacagcattcttagaaaacgtatcatcgttcgtggaacagatcgatgatgttgat
tatttgaacctcttcctcactggtctcgggcagacatcccttgattcaatgaaaatcacc
gaatattatgatgcactgcgtgtggaactcgagtcaagagatctgaccaaatacgtcaac
tcgattctgactgtatatgtggtgaagaaacccgcagactacgaggccgctctatcactg
cttttacgaatacgggaaattgattcggaactcgtcgaagaagccgtaaaatacgtcatt
ttcctagtcgacgctgataggctgttcgacacggcattaggaatgtacgacttctctctg
gtcctcttgatcgctcagcactctcagcgggatcctcgggaatatttaccattcctccgc
gagctacgtgctcttccaaaattctaccaacggtatagaatagacgaccagttgaagagg
aatccaaaagcattagagaacctaaatctggctggtccggattattttgacgaggctatt
ttgtatatcgagaaacatagattgtacaccagcgcatttcaactatggaagaacgacgtg
gagcgacataggcggatacttgacgtatacggtgactatctcttcgagcgtcgcgagttt
aggcaagctgccatcgtgttcattgaggctcggagttcatcaaaagcattggttgcttat
gagcgcgcactcctttggagggaggccttggagctggccattcgtgtcggtactgacgaa
acgtcactcaatgagctcgctcatcgattggctgatgagctcctatcaaaaaagaaattc
gaggaagcagctcgcctgctcttggatcacgcgaagaatctgagactctgtatcaatgca
cttgtacaggggaacatgttctctgaagcgcgtcgtatcgttgctttacacggcgaacaa
acactcctagaggaaatcgttcagcctgctctccttgacagtcgaacgcaattttcggaa
gacatagaggagatgcgaactcagttacggaaacaaacagagcgattacgtgaattgcga
gtcaagaaaacggaagagcccgacgcattttatggtctcgacgatgatccaactctgcac
agcgtggacgtgatgacagatgtttcgatggctccgacagccttcacgcgatacaccgtc
gctccaacgacggcatccaaagcatcaaagcgaacttctcgctcaaagcgtaagatggaa
cgcaaagtgggttcgggccggaaaggtacaattgacgaagaagagtacctcctcagatca
atcgggaagctcgttgtgcgcttcgacgaagtccagaacgatgctgcgcagattctcccg
catctcctacaattttcgccagaacaccgaaatgaggctcatagcctccaatccgaactc
tctgtctttcgggcggagcttcaggtagtcttaaatgaagcttggcccgctaaaaacggt
aatgccacggacggtacaggagagacgaacagttcgagctgggcggagcgaatggaggag
aaaaagagagaacggacgcgagctgttgaaagcgttgtgaagcccgaaatgggagtaaac
gatatgagctggaaggttgatatattacatgtatag
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