Fomitiporia mediterranea: FOMMEDRAFT_117411
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Entry
FOMMEDRAFT_117411 CDS
T03132
Name
(RefSeq) HECT-domain-containing protein
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme04011
MAPK signaling pathway - yeast
fme04120
Ubiquitin mediated proteolysis
fme04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
FOMMEDRAFT_117411
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
FOMMEDRAFT_117411
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
FOMMEDRAFT_117411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_117411
04121 Ubiquitin system [BR:
fme04121
]
FOMMEDRAFT_117411
03029 Mitochondrial biogenesis [BR:
fme03029
]
FOMMEDRAFT_117411
Enzymes [BR:
fme01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
FOMMEDRAFT_117411
Membrane trafficking [BR:
fme04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
FOMMEDRAFT_117411
Ubiquitin system [BR:
fme04121
]
Ubiquitin ligases (E3)
HECT type E3
FOMMEDRAFT_117411
Mitochondrial biogenesis [BR:
fme03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
FOMMEDRAFT_117411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
PKC_C2
Motif
Other DBs
NCBI-GeneID:
18670961
NCBI-ProteinID:
XP_007262816
JGI:
Fomme1_117411
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MPTAGPLTRKIRITVVAADGLSKRDVFRLPDPFAVITVDAEQTHTTSVIKKTLNPYWNEN
FDVVVKDSSVIAVQIFDQRKFKRRDQGFLGVVNIRVSDVLDLELGGHEMLTLDLKKSNDN
LVVHGKLIVYLSTNVSQPISNPGPSVVSGIQTALSNMGLEDTASSLSPVAASSATSGSAI
SRTPSRQGGPSVPAQPEQPAVMQMPTPQINRSPTATASATNPDVETPTSTSRPVSGTVPT
NVSTTGATTTTSSPSAPNVAQTPMPAGAATNASAAAARSFNPHEDPLGPLPPGWERRIDP
LGRTYYVDHNTRSTTWHRPSANQAVNNSAQQGETNAARDQHNRRLLADDMVESAATVNRS
TSAAAASPAPITTASQTTAGSGPLPAGWEERFTPEGRPYYVDHTTRTTTWVDPRRQTIVR
VMGPNGATTTAQPQSISQLGPLPSGWEMRLTSTARIYFVDHNTKTTTWDDPRLPSSLDTN
VPQYKRDFRRKLIYFRSQPAMRAQPGNCQIKIRRNHIFEDSYAEIMRQTPADLKKRLMIK
FDGEDGLDYGGVSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPASGVNPEHLNYFKF
IGRCLGLAIFHRRFLDAYFIVSFYKMILKKKVTLADLESVDAELFRGLTWMLENEIEGVI
DETFTTAEERFGEMVTIELKPGGADVAVTDENKKEYVDLVVEYRIFKRVQEQFEAFISGF
NELIPQELINVFDERELELLIGGMSEIDVDDWAKYTDYRGYEMNDEVIQWFWKCIRSWPA
ERKSRLLQFTTGTSRIPVNGFKDLQGSDGPRRFTIEKSGDPSQLPKSHTCFNRLDLPPYK
DYESLEQKLTLAVEETVGFGQE
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgctggacctctaacgaggaagatcaggatcactgttgtcgcggcagatggt
ctctcgaagcgggatgtcttcaggctacccgaccctttcgcagtcatcacagttgatgcg
gagcagacgcatacaacaagtgtcatcaagaagactctgaacccttattggaacgaaaac
ttcgatgttgttgtgaaggattcctccgtcatcgctgttcagatctttgatcagcgcaag
ttcaagaggcgggaccaagggttcttaggtgtggtcaatattcgtgtcagcgatgtgctc
gacctggagttggggggccatgagatgctcacactggacttgaagaagtccaatgacaac
cttgttgtccacggtaaactgatagtctatctctcgacaaatgtatcacaaccgataagt
aatccgggaccatcggttgtctccggcatacagactgcgttgtcgaatatgggtttggag
gacactgcgtcatctttatctcccgttgcagcttcatcagccacttctgggtctgcgatt
tcgcgaacgccaagtcgccagggtggtccatcagtcccagcacagccggaacaaccagct
gtcatgcagatgcctacgcctcaaatcaatcggtcgccgactgcgactgcatctgcgacg
aatccggacgtcgaaacgccgacatctacatcccgccccgttagtggaactgtcccaact
aacgttagtactacaggggcaactaccactacatcttccccttcagccccaaatgtcgcc
cagactccaatgcctgctggtgctgcgaccaatgcttctgctgctgcggcgcgcagcttt
aatcctcacgaagatcctcttggaccactgcctcctgggtgggagcgtcgcattgaccct
cttggtaggacttactacgtggaccacaacactcgaagcacgacatggcatcgcccatcg
gctaaccaggctgtaaataactctgcacagcaaggagaaacaaatgcggcgcgtgaccaa
cacaatcgtcgtcttcttgcggatgacatggttgagtcagcagcaaccgtaaaccgttcc
acatccgcggctgctgcgagtccggccccgattactactgcatcgcagacgacggctgga
agtggtccactacccgctggatgggaggaacgcttcactccggagggtcggccatattat
gtcgatcatacgactcgtactacgacatgggtggaccctcgccgtcagacaattgttcgg
gttatgggacccaacggtgcgactacgacagcgcaacctcaatcaatttcacaacttgga
cctcttccgtctggatgggaaatgcgacttacgtcgactgccagaatctactttgtcgat
cataatacaaagacgacaacatgggatgacccacgcttgccatcctccttggacacaaac
gtccctcaatacaagcgtgatttccgtcggaaactcatctacttccgcagccaaccagcc
atgcgtgctcaaccaggaaactgtcaaatcaagattaggcgaaaccacatctttgaagat
tcatatgcggaaatcatgagacagacgcctgctgacctgaagaagagattaatgatcaaa
ttcgatggtgaagacggtctcgattacggaggtgtctcaagagaattcttcttcctctta
tcccatgagatgttcaaccccttctactgcttgttcgagtattctgcacacgataattac
actcttcaaattaatccggcatcgggtgtcaacccggagcatttgaactacttcaagttc
attggacgttgtctcgggttggcaatcttccaccgtcgcttcctcgacgcatacttcatt
gtcagcttctacaagatgatcttgaagaagaaagtaacgttggcagatttggagagtgtg
gatgcggagttgttcagaggtttgacatggatgcttgagaacgagatcgaaggcgttatc
gacgaaacattcaccacagccgaggaacgcttcggcgagatggtgactatcgaacttaaa
cccggaggagcagacgttgcagtcaccgatgagaacaagaaagaatatgtcgacttggtt
gtcgagtatcgtatcttcaagcgtgtccaagagcaattcgaagctttcatatccggtttc
aacgaacttatccctcaggaactcataaacgtcttcgacgagcgcgagctcgagttgctc
attggtggtatgtcagagatcgatgttgatgactgggccaagtacacggactaccgtggt
tacgagatgaatgacgaagttatacaatggttctggaagtgcatacgtagttggccagcg
gaacgcaagtcccgcttgctacaatttaccactgggacgtcacgtatacctgtcaatggc
ttcaaagaccttcagggttccgatggaccccgtcggtttactattgaaaaatctggcgat
ccatctcagcttcctaagagtcatacttgcttcaatcgccttgaccttcctccatacaaa
gattacgagagtttagagcagaaactcacactggcagtagaggaaactgtcggtttcgga
caagaataa
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integrated database retrieval system
