KEGG   Fomitiporia mediterranea: FOMMEDRAFT_118735
Entry
FOMMEDRAFT_118735 CDS       T03132                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K17908  autophagy-related protein 18
Organism
fme  Fomitiporia mediterranea
Pathway
fme04136  Autophagy - other
fme04138  Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:fme00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    FOMMEDRAFT_118735
   04136 Autophagy - other
    FOMMEDRAFT_118735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:fme04131]
    FOMMEDRAFT_118735
   03029 Mitochondrial biogenesis [BR:fme03029]
    FOMMEDRAFT_118735
Membrane trafficking [BR:fme04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    FOMMEDRAFT_118735
Mitochondrial biogenesis [BR:fme03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    FOMMEDRAFT_118735
SSDB
Motif
Pfam: PROPPIN WD40_CDC20-Fz Beta-prop_EML_2 WD40 WD40_WDHD1_1st Beta-prop_Vps41 WD40_Prp19 BCAS3_WD40 Beta-prop_EML Beta-prop_HPS5 Beta-prop_RSE1_2nd Beta-prop_IFT140_1st WDR55 Beta-prop_IFT140_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_IFT80_2nd PEP5_VPS11_N Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_DCAF12 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 18671041
NCBI-ProteinID: XP_007263724
JGI: Fomme1_118735
LinkDB
Position
Unknown
AA seq 417 aa
MLFANFNQDFTCISVGTKKGYSITNCDPFGRVYTMNDGARGIVEMLFCTSLIALVGAADQ
PQSSPRKLQIVNTKRQSMICELLFPSSILAVKLNRKTLVVVLENEIYIYDISNMRLMHVI
ETTPNPEAVCALSPSADSSYLAYPSPVPSPATPLSQQTTPASQPPPTTQQSGDIILFSTR
KLIVENVIQAHKAPISFLSINSSGTMLASASEKGTVIRVWSIPGSEKLYQFRRGTREARI
YSMNFNTMSTLLAVSSAHDTVHIFSLGPQKPSNSSGNGKGGPSLSPSPSFDSRDGNQGME
GGYEAFIDGKKGGGVSEFLRRRSMKLTKNITSSVGGYLPNTLTEMWEPSRDFAFLKLPVS
GSRCVVALSGTMPHVMVISSEGYFYSYNIDLENGGECSLMKQYSLLDSSDESTGLVE
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgctctttgcaaatttcaatcaagacttcacgtgtatatcggtcgggactaagaaaggg
tacagcatcaccaactgcgatccatttgggcgggtgtacaccatgaacgatggtgctcgt
ggcatcgttgagatgctcttctgcacgtcactcatcgcgttggttggtgcggcggaccag
cctcaatcaagccctcgcaagttacagattgtgaacactaagcgacaatccatgatctgc
gaattactcttcccgtcgtcaatccttgctgtcaaattgaacaggaagactctcgtggtt
gtattagagaatgagatctacatttatgacatctcgaatatgcgattgatgcatgtcatt
gagaccaccccaaatcccgaagccgtttgtgctctatccccgtccgccgattcatcgtac
ttggcgtatccatcacccgtcccttctcctgcgacccctctctcacagcaaaccactcca
gcatcacagcctccgccaacgacgcaacaatctggcgatatcatactgttttcgactcga
aaattaatcgtggagaacgtaatacaggcacacaaagcgccaatatctttcctttctatc
aattccagtgggactatgcttgcgtccgcatccgagaagggtactgttattcgagtatgg
agtataccgggttcggagaaattatatcagttccgacgaggaacgcgagaagctcgaatt
tattcgatgaatttcaacaccatgtcaacactactcgccgtcagttctgcacacgatact
gtacacatttttagtttggggccccaaaagccgtcgaattcatcaggaaatgggaagggt
ggtccgtcgctgagcccttccccttcatttgacagtcgcgatggcaatcagggtatggaa
gggggttacgaggcgttcattgacgggaagaaaggcggtggtgtatctgaatttttgcgg
cggcggtcaatgaaattgacaaagaacatcacgtcgtctgttggcgggtatctcccaaat
accctgacggagatgtgggaaccgtcgagggatttcgcctttctgaaacttccagtaagc
ggttcgcgatgtgttgtggcgctgagcggaaccatgcctcatgtcatggtaatctcttct
gaggggtatttctactcctacaacattgaccttgaaaatggtggggagtgctctctgatg
aaacaatacagtctattggatagttcggacgagtcgaccggtttggtggagtga

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