Fomitiporia mediterranea: FOMMEDRAFT_119392
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Entry
FOMMEDRAFT_119392 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00061
Fatty acid biosynthesis
fme00071
Fatty acid degradation
fme01100
Metabolic pathways
fme01212
Fatty acid metabolism
fme04146
Peroxisome
Module
fme_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FOMMEDRAFT_119392
00071 Fatty acid degradation
FOMMEDRAFT_119392
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FOMMEDRAFT_119392
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fme01004
]
FOMMEDRAFT_119392
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fme04147
]
FOMMEDRAFT_119392
Enzymes [BR:
fme01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FOMMEDRAFT_119392
Lipid biosynthesis proteins [BR:
fme01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FOMMEDRAFT_119392
Exosome [BR:
fme04147
]
Exosomal proteins
Exosomal proteins of breast milk
FOMMEDRAFT_119392
Exosomal proteins of breast cancer cells
FOMMEDRAFT_119392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
18671073
NCBI-ProteinID:
XP_007264109
JGI:
Fomme1_119392
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MPDLFTTDNLTVALGLVAAGAFLLHSFLTPQSLVHPILLGRQSDVDRVRQKGESAVYRNY
GTGLMSSLPARPAGAIATVLDFIKSDFTGSRSLWSTNITNEKLKARITALGAGLVRIVGL
QPKESNVLLLLNDSLDFLVADLALASQSIPSLTISSLTLLSAVLDAQPPSAIILHVHSFS
HLLEQIAENREYAHHTFILVGEGDLPDVVEKLHVKIFWLADLEKKGANEAPVESPQIQPQ
DIYSVSFYPGPNHELKATRLTHQNMTAGVTATRALFPLSGAISESDSIASSHSLSTPFGR
AVAYTALYENAHFSTIDTSTVFSRSGTSTQETEALKQLIKMSPALTITFLTPPQLNTIVS
SILSLAEKSLFFSVAWRHKLSHLQHGFLSKENMWDNSFFVGPRKAILKGMANSLRAVVIS
GDVVNAKSLTPARLVLSVPVVNTHQHPLVAGPVFFSHPLDFQDFPAKSVTGNPEFAGIAH
VGPPSINVEAKLAGVDDAAIESGVDPIGEIVVRGPSVTLPLEEDREIAPRSWVPLGEKGM
AQSNGSFKVIPARKHRVL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacctgtttacgacagacaacctcaccgtcgcactcggcctcgttgcggcaggc
gcctttctgctgcactccttccttaccccgcagtctcttgtgcatcctattctactcgga
cgacagagcgacgtggaccgcgtgaggcagaagggcgagagtgctgtctacaggaactat
ggcaccggactcatgagttcgcttcctgctagaccagctggagcaattgcaacagtcctg
gacttcatcaaatcagacttcaccggaagtcggtcactttggtcaacaaacattacgaac
gaaaagctcaaggcacgcatcacagctctgggtgctggtcttgtccgtattgttggactc
cagcccaaggaatcaaatgttttgctacttttgaacgacagtcttgactttctcgttgcg
gatctcgctcttgcatcgcagtcaatcccgtcactcacgatttcttctctgactctcctc
tctgccgttcttgacgcacagcctcccagtgcaataattcttcatgtacactctttcagt
catctccttgaacagattgccgagaatcgagagtacgcgcatcatacgttcatcctcgtt
ggtgaaggggaccttccggacgtcgtcgagaagcttcatgtaaagatcttctggctcgcc
gacttggaaaagaagggagcgaatgaggcacctgtcgagtcaccgcaaatccaaccccag
gatatctactccgtatcattttatcccggacccaaccatgaattaaaagcaactcggttg
actcaccagaacatgactgcgggtgtcacagctactcgcgctttattcccactcagtgga
gcgatatccgagtctgactccatagcctcctctcactcactgtcaactccctttggacga
gccgtcgcgtacacggcattgtatgagaatgctcacttcagcacaatcgatactagtact
gtgttctccagaagtggcacatccactcaggaaaccgaggccttgaaacagcttatcaaa
atgtccccggctctaacaatcactttcctaacgccacctcagctcaacactatcgtctcg
tctatcctgtcgcttgcagaaaagtctctcttcttttctgtggcatggcgacacaagctc
tcccatctgcaacacggtttcctcagtaaagaaaacatgtgggacaattccttcttcgtc
ggaccacgtaaggctattttgaaaggcatggccaatagccttcgcgccgtcgttattagt
ggtgacgtggtcaatgcgaaatctctcacgcccgctcgccttgtgctctccgtccctgtt
gtgaacactcaccagcacccgcttgtggcaggacctgtgttcttctcgcatccacttgac
ttccaggatttcccggcaaaatcggtaactggcaacccggagtttgcgggcattgcccat
gttggtccgccgtcgatcaacgtcgaggcaaagcttgcgggcgtagacgatgcggcgatc
gaaagcggagtggatcccattggcgagatcgtcgtccgtgggccgtccgtaaccctcccc
ctcgaagaggacagggagatcgctcctcgtagttgggtgccgctcggagagaaagggatg
gctcagtcgaacggaagttttaaggtcattccggcgcgcaaacatcgtgtcttgtga
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