Fomitiporia mediterranea: FOMMEDRAFT_119410
Help
Entry
FOMMEDRAFT_119410 CDS
T03132
Name
(RefSeq) SHQ1-domain-containing protein
KO
K14764
protein SHQ1
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_119410
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
FOMMEDRAFT_119410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
CS
PIH1_CS
Motif
Other DBs
NCBI-GeneID:
18671075
NCBI-ProteinID:
XP_007264117
JGI:
Fomme1_119410
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MITPRFSCSQTADAVTIRIHAPAIRASDVEIHVDETLFSVHINPYFLRLAFPAPVVEDDA
SSAVYDPTSGYLTVSLTKAMPGEHFKDLDVLAKLLAPPKRDEPAPHPIIEVISSQDAGTE
EHVSDDDISEVTRDLSLDQREVLEAVENDWHLPQQVPETAVPSSVSLSTERRYGFLDAYT
GYFKHVGHTENEVNELGLDAESLSLEERRARRVKHEDEKWDEEYYMADYVDEENIREHIV
YKPPADASCSPNLPDPVVFTEQENMEMLRLPRKEYLATSQQTHNLYLTLLTILFSYAYDA
RTTQSDPTPESAWTICSLTPAFSALDPPPYAFQTTTPLRFTQRDLQDALIPSLRRSLAFP
LYRSFALAEKCLEDVSVVLQHGRRAVLRTLLETKRILDMHEVYYVYSKIWVDDFCQWVAS
DVSEEILKALGQTLASTRIEKQSLGWDIPALEAAALQELEQPREPDSDDESDPGGPNPLS
PDNSGEEENGITEEDHPSSSSSSAASTLSSSSMSDSAEGSESESDASDASDVKSSR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaccgcgcttcagttgctcgcaaaccgcggacgcggtcactatacgcatacac
gcacctgctatacgcgcatctgacgtggaaatacatgtcgacgagacactcttctcggtt
cacatcaatccgtatttcctacgattagcctttccggcacctgtcgttgaggatgacgca
tcttccgcagtgtacgacccaacatcgggttatttgaccgtatccctcaccaaagcgatg
ccaggtgaacacttcaaagacctagatgttctcgcgaaactgctagctccgcctaaacgc
gatgaaccggcaccgcatccgatcattgaggttattagttcgcaggacgctggaacagaa
gaacacgtctcagacgatgatatcagtgaagtgacacgggatttgagcctagatcaacgc
gaagtgttggaagcagtagaaaatgattggcatcttcctcagcaagtaccggaaactgca
gtgccttcgtcggttagtttgtcaaccgaaaggcgatacggatttttagatgcatacact
ggttatttcaaacatgtcggtcataccgagaacgaggtgaacgagcttggtttagatgct
gaaagcctttcgctagaagagcgacgagcaaggcgagtcaaacatgaagatgagaaatgg
gacgaagagtattatatggcggactatgttgacgaagagaatattcgggaacatatcgtt
tacaagccaccagcagatgcttcatgttcgccaaaccttcccgatccagtggtattcact
gagcaagaaaatatggagatgctgcgactcccgcgaaaagaatacctggcgacttcacaa
cagacccacaatctttacctgactctcctcaccattctcttctcgtatgcctacgatgca
cgaactactcaaagcgaccccactcccgagagtgcatggacaatttgttccctcactccg
gccttctccgctctcgaccctccgccatatgctttccaaactaccactccactaagattc
acccaaagggaccttcaagacgcactcataccatctctcagacgttccctagcgtttcct
ctctaccgctccttcgcactagcggagaaatgcttggaagacgtgtccgttgttcttcag
catggtcgtcgggccgtgctacgaacgttgcttgaaacgaagagaattctggacatgcat
gaggtgtattatgtctatagcaagatctgggtggatgacttttgccaatgggtcgctagt
gatgtcagcgaggagatactcaaagcactcggtcagactctcgcctctacgcgaatcgaa
aagcaaagcctgggatgggacatccctgctctcgaagcagcagcactgcaagaactcgaa
caaccacgcgaaccagacagcgacgacgaatccgatccaggtgggcccaatcctctctca
cccgacaattctggcgaggaggagaacggtattactgaagaggaccacccttcatcaagt
tcctcctcagcagcatcgactctatcttcctcatcgatgtcagattccgccgaggggtcc
gagtccgagtccgatgcgagtgatgcgagtgatgtcaagtcctcccgttga
DBGET
integrated database retrieval system