Fomitiporia mediterranea: FOMMEDRAFT_120127
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Entry
FOMMEDRAFT_120127 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
fme
Fomitiporia mediterranea
Pathway
fme03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FOMMEDRAFT_120127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_120127
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_120127
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
FOMMEDRAFT_120127
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
FOMMEDRAFT_120127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
18671111
NCBI-ProteinID:
XP_007264669
JGI:
Fomme1_120127
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MFGGSWGQQNQQQQQQQQQQQQQNQPQPGTSAFGQQQQPNAFGSGATGGFGGGAFGQNTQ
QPTVNPMFGSSTSNPSSTGAAFGSFGGGGTSAFGAPKPPAFGAFGGGGTSGTSAFGSGGT
FGQTNPSGTSAFGQPAGGTSAFGGTGTGLFGQKPAAPTTGFGSTSTGPTITTADGSVPPV
TTGSANPPYSVFSEKDANTPNITLNYQSISTMPAYRGTSFEEIRVQDYAQGRKTAGSFGQ
SATFGLAPSQSTSTTFGQPAANTSTFGSFGQNSQQSSTQPSTTFGSFGQPATTQPPAFGT
GTSTGAFGSFGQNTQQPQQQPSGTGLFGGGGAFGQSNQQQQTGSAFGAFGQSNQPKPFGA
FGQTSGTTGFGSGGGGGGLFGQSTNQPAGQPTTGLFGQPANQNQGSSAFGSFGANANKPA
FGQPAAQQPASTGFSLFGQNNQQQQQQQNQPQGQQPSTGLFGSGTTGTGTGLFGQNNQQQ
QGQQGQQGGTQPSTGLFGQPAPQPSTGLFGTGTTGTGLFGNNNQNKPTGFGLFGGTNNQA
AGSGSTQPSTGLFGQPFGQSTTQPAPGTTAFGGSSLFGQKPPTTNAFGQSTAQPASTGLG
SSLFGASALGGTGGGFGQSAVGTGGGQGSLTASIAQPVQENLPIFSLLNNKEQPASFAPP
PKKMSNFFADIPTRTPLGISNARLTNGGKLRGFGASLSAAGLNRYGGLQSSLASSKNAGN
LALSRGDSRSLLGADAFTSGPSLGSDGKSSPKKLVLHKKIEPSDVFGRSRSASASSKVEF
NPAISIASREKEASSMPPPPLPTAPPPQRKSSSAEKDASELQDGDYYVKPPLDVLRKLSN
QELSSFEGLVVGRKGHGEIQFLQPVDLTTLPKLQDLLGKIIQMDKQELTVYPESTLVEIE
KPRVGEGLNVRTRVTLHGCLPRDKATGEPIKDPKHPAFIKQKRRLQIMKRTQFESFDPET
GTWVFIVDHF
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcggctcttggggtcagcaaaatcagcagcagcagcaacagcagcagcaacaa
caacaacaaaatcaaccacaacctggaacgtcagcatttgggcagcagcagcagccgaat
gctttcggttcgggtgcgactggcggctttgggggtggagcctttggtcaaaacacccaa
cagccgactgtgaatccgatgtttggaagtagtacatcgaatccatcaagcactggagcg
gcctttggttctttcggtggtggagggacatctgcgtttggcgcaccgaagcccccggca
tttggagcgtttggaggcggtggtaccagtggcacctcggcatttggaagtggagggacg
ttcgggcagacgaacccaagtggtacgtctgcatttggtcagcctgcgggagggacaagc
gcgtttggtgggacgggaacgggtttattcggtcagaagcctgcggctccgactactggg
tttggaagcacatcgacaggtccaaccataaccacagccgatgggagcgttccaccagtg
actacgggttccgccaatcctccctactctgttttttcggagaaagatgcaaatacacca
aatatcactctgaattaccaaagcatcagcacgatgcctgcgtaccgcgggacctcgttt
gaggaaattcgtgtccaagattatgcgcaaggacgcaagacggcaggcagctttggtcaa
tctgcgacttttggattagcaccttcacagtcgacgtctactaccttcggtcaacccgcc
gcaaacacgagtacctttggttcctttggtcagaacagtcaacagtcctcaacgcagccg
tctactactttcggatcttttggacagcccgctacgacgcagccgccagcatttggcaca
ggcaccagtactggggcttttggctcatttgggcagaacacacaacaaccgcagcagcag
ccgagtgggacaggcttgtttggtggaggaggtgcattcggacaaagtaatcagcagcag
cagactggatccgcatttggtgcattcggccagtccaatcagccgaagccgtttggtgct
tttggtcagacctcgggtacaactggctttggaagcggaggtggaggtggaggcttgttt
ggacaaagtacaaaccagcctgcaggacaacctactaccggattattcggtcagcccgcc
aatcaaaaccagggttcatctgcatttggctcctttggtgcgaatgcaaataaacccgca
tttggacaacctgctgcgcagcagccagcgtctaccggtttcagtctttttggccagaat
aaccagcaacaacaacagcagcaaaaccaaccacaaggccaacaaccatcaaccggcctc
tttggtagtggtacgactggaacagggacaggtctgtttggtcaaaacaaccaacagcaa
cagggccagcaaggtcaacaaggtggcacgcagccgtcgactggtcttttcgggcaaccc
gcccctcagccttcaaccggcttgtttggtactggaacgacaggaacgggtctcttcgga
aataataatcagaataagccaacaggattcgggctgttcggtggaacgaacaatcaagcg
gcaggttctggctctacgcagccttctacaggattatttggtcagccatttgggcagtca
accactcagccagccccaggaacaactgcgtttggtgggtcatcgttgttcggccaaaag
cctccaacaacaaatgcttttggtcaatcaactgcgcaaccagcttctaccgggttgggt
agctcactgttcggtgccagtgcattaggtggtactggtgggggatttgggcaatccgct
gttggtactggcggaggacaaggttcattgactgcttcgattgcccagccggtccaagaa
aacttgcctatcttcagcttgttgaacaacaaagaacaacctgcttccttcgctcctccg
ccgaagaagatgtcgaacttcttcgctgatattcctacacgcactccacttggtatatcg
aatgctcggctgacgaatggagggaagctacgcggcttcggtgcttcattatccgcagca
ggtctgaatagatacggcggactccaatcatcactggcatcgtcaaagaacgccggcaac
ctcgcgctcagcaggggcgatagcaggagcctgcttggtgcagatgccttcacgagtggt
ccatcactaggcagtgacggcaaatctagcccgaagaaacttgttctccacaagaaaatc
gaaccaagtgacgtctttggtcgttcgagatctgcttctgcttcctcgaaagtggagttt
aatcctgcgattagtattgcctcgcgcgagaaagaagctagctcaatgccacccccgccg
ttgccaactgccccacccccacaacgaaaatcctcgtctgccgagaaggacgcgtcagaa
ttacaggacggtgattattatgtcaaaccacctctcgacgtgctacgtaaattgagtaac
caggagttgtcgtcatttgaaggactcgtagtcggtcgcaaaggacacggagaaatccaa
ttcctgcaaccggtagacttgactacgctaccaaagctgcaggatcttcttggaaagatc
atacaaatggacaagcaagaactcaccgtgtatccagagtcgactctggtcgagattgag
aaacctcgagttggtgaaggcctcaacgttcgtacacgcgttacgctccatggttgtttg
cccagggacaaagcaaccggtgaacctattaaggatcctaaacatccggccttcataaag
cagaaacggaggctgcagattatgaaacgcacacaattcgaatcttttgaccctgagacg
gggacttgggtctttatcgttgaccacttttga
DBGET
integrated database retrieval system
