Fomitiporia mediterranea: FOMMEDRAFT_120915
Help
Entry
FOMMEDRAFT_120915 CDS
T03132
Name
(RefSeq) spindle pole body protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
fme
Fomitiporia mediterranea
Pathway
fme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOMMEDRAFT_120915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_120915
Spliceosome [BR:
fme03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
FOMMEDRAFT_120915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
18671148
NCBI-ProteinID:
XP_007265330
JGI:
Fomme1_120915
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MAKTRSKKQGSDASLARPVKKARLSIESSEDGQKVEQSVEEPLQPEHGEDGLNEDVYDED
SKNSGEPTHTSDMYLDTVNRAALDFDFEKVCSVCLSNINIYGCLVCGKYFQGRGRNSYAY
AHSIHDDHHVFINLDTKKVYVLPDGYIVSDPSLEDISFVLAPSFTPQSIASLSSPSHLTK
LSYDLSNKPYLPGYVGLNNIKRHDHMNVIILALTHIPPLRDYLLLSAFGGKESELLKRFA
GLAKKLWNPRLFKNQVSPHEFLQEVGRASTGKFRLEEQGDPTEFLGWLLNRLHKDMGGSK
KKNSSIIYSTFQGELRMETQQVIVKPEGESSHRPQFDIDRETKTTTSPFLFLSVDLPPPP
LFQDSVEKNIIPQVSLASVLSKYDGRTTQEYLGQLRRFKCQRLPRYLILHFKRFTKNIFV
EEKNPTIVNFPLRGVDFSEYLDAPPNHPSTVYDLIANVIHESVAGTTRDKVNTAWKVHLR
AGSGGGDNEKWYQIQDLIVEEVRKEMIFLGETVIQIWERRDQPTPLDEQKMAVDGR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaacaagatcaaagaaacagggttcggatgcttcattggcccgacccgtgaag
aaagcgagactgagtatagagtcttctgaagacggacagaaggtagagcagagtgtggag
gaacctttacaaccggaacacggagaggatggactgaatgaagacgtctacgacgaagac
tctaagaactctggcgaacccacacacacgtctgacatgtacctcgacacggtaaaccgt
gcagccctcgatttcgactttgagaaagtatgctctgtttgcttgtcaaacataaacatc
tacggttgtcttgtttgcgggaagtacttccaaggaagaggccgaaactcctacgcttac
gcccattcgatacacgacgatcatcatgtcttcataaacttggataccaagaaggtttac
gttcttccggacggatacatagtttccgatccttctctagaggacatatcgtttgttttg
gctccatcttttactcctcagtcaattgcatcgctatcatccccgtcccatttgacaaag
ctatcctacgacctctcaaataaaccataccttcctggatacgttggactgaataacatc
aaacggcatgatcacatgaacgtcattatccttgctttaacgcacataccaccattacgc
gactacctgcttctttctgccttcggcgggaaggaaagcgagctcctgaaacgattcgct
gggttagcaaagaagctgtggaatccacggcttttcaaaaatcaagtcagtccacacgag
ttcttgcaggaggttggtcgtgccagtacgggaaaatttaggttagaggagcaaggtgat
ccgactgaattcctgggttggcttcttaatcgacttcacaaggatatgggaggatcaaaa
aagaaaaactctagtattatctattctacgttccaaggagaactccgcatggaaacgcaa
caggtcattgtgaaaccagaaggagaatcaagtcaccgtcctcaatttgatattgacaga
gaaacgaaaacaaccacatcacctttcctctttttgtccgtcgatctcccccctcctccg
ctgttccaggactccgtcgagaagaacatcattcctcaagttagcttggcgtctgtgcta
tcaaagtatgacggtagaacaactcaggaatatttgggccagttacggcgattcaaatgc
cagcgcttaccccgttatctcattctccactttaagcgctttacgaaaaacattttcgtc
gaagagaagaacccgaccattgtgaacttcccactgcgaggagtggactttagcgaatac
ttggatgctccgccaaatcatcccagtacagtatacgatctgatcgccaacgtaattcac
gagtccgtagctggaacaacgcgcgacaaagtgaacacagcctggaaagtacacttgcga
gccggctcaggcggtggtgataacgagaagtggtatcaaatacaagatttgattgtggaa
gaagtgagaaaggagatgatatttttaggcgaaaccgttattcagatttgggaaagaaga
gaccaacctactcctcttgatgaacagaaaatggccgtggacgggcgatga
DBGET
integrated database retrieval system