Fomitiporia mediterranea: FOMMEDRAFT_121290
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Entry
FOMMEDRAFT_121290 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K14960
COMPASS component SPP1
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fme03000
]
FOMMEDRAFT_121290
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_121290
Transcription factors [BR:
fme03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
FOMMEDRAFT_121290
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
FOMMEDRAFT_121290
COMPASS/SET1 complex (yeast)
FOMMEDRAFT_121290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD
CpG_bind_C
PHD_5
PHD_2
KIF21A
zf-HC5HC2H
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
18671161
NCBI-ProteinID:
XP_007265532
JGI:
Fomme1_121290
LinkDB
All DBs
Position
Unknown
AA seq
1056 aa
AA seq
DB search
MFGSRRTSASMSPTVPTTGLSGLDVLVQAATEERERIDVHRRQSGGEERQPSFDPDTIRP
TSLSPVEVRSPVNLQALPPPTPPYTAYSQMSHYMAADKANLNYKEQAFTEDDHPGKHRRP
SPVPSRSPHMGVFETSHHRSYVGLPSTSSTFERRSHSPETKHEKYDTQSHVFDESSHRLS
SHAKRPSTKPGSMYMQPSSTRSTTHQVPFSETQAMPHFQQPLSPVEPTAVRHVRRSPPRS
RPRPKKPGSAALALMEKEFREVALADRVKHEPDERQMGGLTDAFSPPRQTQTRPSYMSSK
SLQSNERGAVDDEDVDDFFNSTFDSPKNSERTINPRISHADISHTRQTMEDGEFAGAMWG
DSFTGQSVPIQTGTSAIKSRSSSPEGLNEFADRYSPAQHVPEVSDEAVMSEVEADILDEL
ADAAGAATSEDERTEFDDQATDNMEVDVENELLSLVDGPLDVPSKPHHHPGQTPLHVGKT
SEPVLCTEFNQTYMPPSEAPEATSAQVKDSKKASSKSKAKAKVDDASSHDKLSLVKVEES
VAKPMKSKSGSKPRPTKSAPVDKSKAGKIAKEASAPASPSLPTPVTALPSAGTPTDEVFP
MVTSSGRMVTKSKKSAAAATPTVAANQPSSSHTRKKPALAASTGDGNASRSRSHSVMPRA
SVDPEVHREKTAKDDDEKQKDPAAEEVDDADKDKLYCICRTQYDEDRVMIACDRCDEWYH
TQCVGMPDLLVDLVDQFICENCIAQNPNLNLRTTYKQRCYAGLNHPDPDSPDACHKPSRG
AYSKYCSDECGVRHMHHKIQLWAGNGGDVRSLWESVKDAKRREGFVVPEPGRILPIVILA
GIQNGDVTQTQANVPDPGQVVVDEEGRNSIVTRLEDQLQTVVQEREELKKELEVTSWRER
LLQLASDRAENVGDCGWDQRLVYGDEEWLEFGAGVLESYEDNAPNGHSEENQDMEVDGQG
QEGEWWCHGKKKCERHMGWQRVRAADIEKERFTKERALADLTTREREIRSRIEDILHPQS
RPITGSFPESTFKFRLPNANSEGGPKRTKKKVATVA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggtcccgacgtacttctgcgtcgatgtcaccaactgtcccgaccactggattg
agtggacttgacgtccttgtccaggcagcgacggaggaaagggaacgtatagatgtacac
agacggcagagtggaggtgaggaacgccagccttcgttcgatcccgacaccataaggcct
acatcgctcagtcctgtcgaggttcggagtcctgttaatcttcaggccctaccacctccc
actcctccctatactgcttattctcaaatgagtcactacatggcggctgataaagctaac
ttaaattacaaagaacaggcctttacagaggacgatcatccaggaaagcaccggcgtccc
tcgcctgtaccatctcgatcgcctcacatgggtgtctttgaaacttcgcatcatcgttct
tatgtcggactaccttcaacaagcagtaccttcgaacggcgcagtcattcgcctgagacg
aaacatgaaaagtatgacactcaatctcatgtattcgacgagagctcgcatcgtctttca
tctcatgcgaagcggccttcaacaaagccagggtcaatgtacatgcaaccgtcatcaacg
cgttctactacgcatcaagttcctttcagcgagacgcaggccatgcctcactttcaacaa
ccactatctccagtggaacccacggctgttcgtcatgttcgtcgctcacctcctcgtagt
agaccgaggccgaagaaacctggctcagctgcacttgcactcatggagaaggagtttcgt
gaagttgctttggcggacagggtcaaacatgagcccgatgaacgccaaatggggggcttg
actgacgcgtttagcccaccacgacaaacacagacaagaccgtcatatatgagctccaag
tccttgcaatcgaacgaaaggggcgctgtggatgatgaagacgtggatgacttcttcaat
tcgaccttcgactctcctaagaactccgaacgaacaataaacccacgaattagtcacgcg
gatatttcgcatacaagacaaacaatggaagatggcgagtttgcaggcgcgatgtggggc
gactcgttcacaggacagtctgttccaatacaaacgggtacctctgcgataaagtcgaga
agttctagtcccgaagggttgaacgagtttgccgaccggtattctcctgctcagcacgtc
cctgaagttagcgacgaagcagtaatgtcggaggtggaggctgatattttggatgagctc
gctgatgctgctggcgcagctacgtcagaagacgagaggacggaattcgatgatcaggca
acagataacatggaagtggacgtagagaacgagctgttgagccttgtagatggcccacta
gatgtcccttcgaagccacaccaccaccctggacaaacacccttgcatgtagggaaaact
tctgaaccagtgttgtgtactgagttcaatcaaacgtatatgccaccatcggaggcacct
gaggcaacgagtgctcaagtaaaggactcgaagaaggcatcatcgaagtctaaggcgaag
gcaaaggtggatgacgcttctagccatgacaaactgtccttggtcaaggtcgaagagtcg
gttgcgaagccaatgaaatcaaagtctgggtcaaaaccacgtcccacaaaaagtgctcct
gtggataaatctaaagcaggaaaaattgcgaaggaggcatcggctcctgcctctccttct
cttccgactccagttacggcccttcccagcgcaggtacaccgacagatgaagtgttccct
atggtcacctcttctggtcggatggttacgaaatccaaaaaatccgctgctgccgcaacg
ccaacagttgcggccaaccaaccatcttcgtcgcatactcgaaagaagcctgctcttgct
gctagcacaggggacggcaatgcttcacgctcacgctcccattccgtgatgcctcgagca
tctgtggatcctgaagttcatcgtgagaaaaccgccaaggacgatgacgagaaacaaaaa
gatcccgcggccgaagaggttgacgacgcagacaaggacaaactatattgcatctgcagg
acacaatacgacgaagacagagtaatgattgcttgtgacagatgtgatgaatggtaccac
actcaatgcgtgggcatgcccgatctcctcgtcgaccttgttgaccagttcatttgtgaa
aactgcatcgcccaaaatccgaatctgaaccttcgaacgacgtacaaacaacgttgttac
gctggcttaaaccatccggacccagactcaccagatgcttgccacaagccgtctcgcggc
gcatactccaaatactgctctgacgaatgtggcgtaagacacatgcatcacaagatacag
ttgtgggcaggtaatggcggagatgtccgcagtctctgggaatctgtaaaagatgcaaag
cgtcgcgaaggttttgttgtccctgaacctggtcggattcttccgatagtcatactggct
gggatacaaaatggagacgtaacccaaacgcaagcaaacgttcccgatcccggtcaggtt
gtagtagacgaggaagggagaaacagtattgttacccgtctcgaggatcaacttcagacg
gtcgtgcaggaacgagaggagctcaaaaaggagctcgaagtaacttcctggagagaaaga
ctactgcaactcgcgtcggaccgcgctgagaacgttggtgactgcgggtgggatcaaagg
ttggtctacggtgatgaagaatggttagaatttggtgctggtgttctggagagttacgag
gataatgcaccaaatggccattccgaagaaaaccaggacatggaagttgatggacagggc
caagagggtgaatggtggtgccatggaaagaaaaaatgcgagagacatatgggctggcaa
cgggttcgtgcagcagacatcgaaaaggagaggttcacgaaagagagggcgcttgcagat
ctgaccacgcgcgaacgcgagatcaggagtcggatagaagacattcttcacccacagtca
cgacccatcacaggatcattccctgagtcaacattcaagttcaggctccccaacgcaaac
tcggaaggagggccgaagcggactaaaaagaaagttgctaccgtagcataa
DBGET
integrated database retrieval system
