KEGG   Fomitiporia mediterranea: FOMMEDRAFT_121682
Entry
FOMMEDRAFT_121682 CDS       T03132                                 
Name
(RefSeq) WD40 repeat-containing protein
  KO
K14963  COMPASS component SWD3
Organism
fme  Fomitiporia mediterranea
Pathway
fme03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    FOMMEDRAFT_121682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fme03036]
    FOMMEDRAFT_121682
Chromosome and associated proteins [BR:fme03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     FOMMEDRAFT_121682
    NSL complex
     FOMMEDRAFT_121682
   HMT complexes
    COMPASS/SET1 complex
     FOMMEDRAFT_121682
    COMPASS/SET1 complex (yeast)
     FOMMEDRAFT_121682
    MLL-HCF complex
     FOMMEDRAFT_121682
    MLL3/MLL4 complex
     FOMMEDRAFT_121682
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     FOMMEDRAFT_121682
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 eIF2A Nup160 WD40_like PROPPIN RMC1_N WDR54 Nucleoporin_N MIOS_WD40 Coatomer_WDAD Kelch_6 IKI3
Other DBs
NCBI-GeneID: 18671181
NCBI-ProteinID: XP_007265752
JGI: Fomme1_121682
LinkDB
Position
Unknown
AA seq 327 aa
MKQEPLPEDAKLPPANREQGPDYKLHYTLSGHTLSISCIKFSPNGKLLASGSSDKLLKLW
DAYTGKFLLTMSGHTEGVSDIAWSPNSELLASASDDKTIRIWDVDSGSTSKVLVGHTNFV
FCVNFSPTSNLLVSGGFDETVRIWDVARAKCIRTLPAHSDPVTAVNFNRDGTLIVSCSMD
GLIRMWASDSGQCLKTLVDDDNPICGHVSFSPNSKFILASTQDSTIRLWDFTTSRCLKTY
IGHLNRTYCIPSTFSIANGLHIVSGSEDGKVYIWDLQSRKVVQVLEGHKDVVLAIATHPK
YNIIASSSMEKDLTIRIWIDESACDGG
NT seq 984 nt   +upstreamnt  +downstreamnt
atgaagcaagagcctttaccggaggacgcgaaacttccaccagcgaacagggaacaggga
ccagattataagttacactacactcttagtggacacacattgtctatctcctgcattaaa
tttagccccaatggcaagctgcttgcctctggttcctctgataagttattaaagctatgg
gatgcatacactgggaaatttctgttgactatgtctggccacacggagggcgtatcggac
attgcgtggtctcccaatagtgaacttctcgcctctgcttcagacgataaaacaatccgt
atctgggatgtcgattctggttcgacctcgaaggtcctcgtaggccataccaacttcgta
ttttgcgtgaactttagcccaacatcaaacctcttggtatctgggggctttgacgaaact
gtacgtatatgggatgttgctagagccaagtgcattagaacgctcccggctcactcagat
cctgttaccgcggtgaacttcaatagggatggtaccctaatagtctcatgttcgatggat
ggcctcatacgtatgtgggcatccgattccggccaatgcctcaaaacgttggtggacgac
gataatccgatttgtggccatgtctctttctcgccaaactcaaaattcatactagcatct
acacaggattcgacaattcgattatgggattttactacgtcgcgatgtttaaagacgtac
attggacaccttaatcggacttactgtatcccttctaccttcagcattgcgaatggactg
catattgtgagtgggagtgaagatggtaaagtatacatttgggatcttcaaagccgcaag
gttgttcaagttctagaaggacacaaagacgttgtcttggccattgctacgcatccaaag
tacaacatcatcgcgtcatcgtcgatggagaaagacctcacaatcagaatttggattgac
gaaagcgcttgtgatggtggctga

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