Fomitiporia mediterranea: FOMMEDRAFT_122540
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Entry
FOMMEDRAFT_122540 CDS
T03132
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K06943
nucleolar GTP-binding protein
Organism
fme
Fomitiporia mediterranea
Pathway
fme03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FOMMEDRAFT_122540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_122540
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
Pre-60S particles
GTPases
FOMMEDRAFT_122540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOG1_N
NOG1
NOGCT
MMR_HSR1
FeoB_N
RsgA_GTPase
SdiA-regulated
Motif
Other DBs
NCBI-GeneID:
18671220
NCBI-ProteinID:
XP_007266271
JGI:
Fomme1_122540
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MSTTKGLKAIAPVPTASDFLDIVLNKTQRKTPTVIHKNFKISRIRNFYMRKVKFTQDSFD
EKLGAILTEFPVLDDLHPFLASLMNVLYDKNHYKLALGQLRTCRHLIDQVAKDYVRLLKF
GDSLYRCKQLKRAALGRMATIMRRQKDPLAYLEQVRQHIARLPAIDPNTRTLLLCGYPNV
GKSSFLNKVTRADVDVQPYAFTTKSLFVGHLDYKYLRWQVIDTPGILDHPLEDMNTIEMQ
SITALAHLKACVLYFIDPSEQCGYSVQAQCSLFHSIKPLFGGKPVLLVVNKTDICRLDDL
PPESRALVDEIVNSEGVKCVQVSCYSEEGVMDVKNAACDALLAHRVETKLKGSKINTVIN
RIHVAQPKPRDDVERKPFIPKAVSSKKKFDKNDPERRMLERDIEDADGGAGVYIINLKKN
YMLESDEWKFDIIPEIMDGKNIADFVDPDIEEKLEALEREEERLAEEGFYDENSDLELGS
EDEREAEELQAAQTKRKESQATKKSLKNGARLPRTAGLRTLSDMSESLTKAGYDPSRIQE
RAALLAKAQGLKRKRAQEEGMDIDEEGDEDGEGDEGDWMDVDGEDRTPQKRAKSNSGAVV
LSGRGPRTNRQLAGLRDDAQAAKAIKLRNLGQRERNYQAKAGEADRAIKTKMPKWMYTGK
RKMGKTNRR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaacaaagggtctgaaggccattgcgcctgttccgactgcatctgatttcctt
gatatcgtactaaacaaaacacagaggaaaacaccgacagttatccataagaactttaag
atcagtcggatacgaaacttctatatgcgcaaggttaagttcacgcaggattcgtttgat
gagaagcttggggcgattttgacggagtttcctgtgctcgatgacttgcatcctttcttg
gcttcactcatgaacgttttgtatgacaaaaaccattacaagctggcattgggtcaactg
cggacatgcaggcatctgatcgaccaggttgcaaaggactacgtgcgactactcaaattc
ggagacagtctttacagatgcaaacagctgaaacgtgcagcgctcggtcggatggcaact
attatgcgccgtcagaaggatccacttgcatatcttgagcaggtccgtcagcacattgct
cgtcttcccgcgatcgacccgaatacccgtacacttttattatgcggctatccgaatgtg
ggcaagtcgtccttcttaaacaaggtcacacgtgcggatgttgacgtccagccgtacgct
ttcacgaccaagtcgcttttcgtgggtcatttggactacaagtacctgcgatggcaggtt
attgacacacctgggatccttgaccatccgcttgaggacatgaacacgatcgagatgcag
agcattactgcactggctcacttaaaggcatgcgtactttatttcatcgaccctagcgag
caatgcggttattccgtccaggctcaatgtagcctcttccactccatcaagccgctcttt
ggcggtaaaccggtccttcttgtagtcaacaagaccgatatttgtcgtcttgatgatttg
ccgcccgagtcgcgtgcgctggtcgacgaaatagtaaactcggaaggtgtcaaatgtgtc
caggtgtcttgctactctgaagaaggtgttatggatgtcaagaacgctgcttgcgacgcc
ctgcttgcacatcgcgtggagacaaagttgaaaggtagcaagatcaacacggtcattaac
cgaatccatgttgctcaacctaaaccacgcgacgacgttgaacggaaacctttcattccg
aaagcagtctcgtcgaaaaagaaatttgacaagaacgacccggaacgccgcatgttggag
cgtgacattgaggatgcggatggtggagcaggagtgtatattatcaacctcaagaaaaac
tatatgcttgaaagtgacgaatggaaattcgacattatcccagaaattatggacggcaag
aatattgcggacttcgtggatccagacattgaagagaaactcgaagctctcgagcgcgag
gaagagcgactcgccgaagaaggtttctacgacgagaattcagaccttgaactcggctcg
gaagacgagcgtgaggcagaggagctccaagccgcccaaaccaagcgcaaggaatcgcaa
gcgacgaagaaatcactgaaaaatggtgctcgactcccacggactgcgggtctgcgcacg
ctgagtgacatgtcggagagcctgacgaaagccgggtatgatcctagtcggattcaagag
cgtgcagcgttacttgcaaaggcgcagggcctgaagcggaagcgtgcacaggaagagggg
atggatattgatgaagagggtgacgaagacggggaaggagatgagggagattggatggat
gttgatggagaggataggacgccgcagaaacgggcgaaatcgaactctggtgctgtcgtc
ttgtccggaaggggaccgcggacgaatagacaactggcgggtctgcgtgatgatgcgcaa
gctgcgaaggcgattaagttgcgcaaccttggacagcgtgagcgcaactaccaagcgaag
gcaggagaagctgaccgtgctatcaagacaaagatgccgaagtggatgtacacgggcaaa
cgaaaaatgggcaagaccaacaggcgttga
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