Fomitiporia mediterranea: FOMMEDRAFT_123012
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Entry
FOMMEDRAFT_123012 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme04136
Autophagy - other
fme04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
FOMMEDRAFT_123012
04136 Autophagy - other
FOMMEDRAFT_123012
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
fme01001
]
FOMMEDRAFT_123012
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_123012
Enzymes [BR:
fme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
FOMMEDRAFT_123012
Protein kinases [BR:
fme01001
]
Serine/threonine kinases: Other
VPS15 family
FOMMEDRAFT_123012
Membrane trafficking [BR:
fme04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
FOMMEDRAFT_123012
Autophagy
Autophagosome formation proteins
PI3K complex
FOMMEDRAFT_123012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
VPS15-like_hel
PK_Tyr_Ser-Thr
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
PEP5_VPS11_N
TCAD9
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR11_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
18671244
NCBI-ProteinID:
XP_007266637
JGI:
Fomme1_123012
LinkDB
All DBs
Position
Unknown
AA seq
1647 aa
AA seq
DB search
MGNNQSSAIVSRTGGALDTFVSELGPDIIYDKSLGSSRFLKTVRCRHRNGFLVAKIYVKP
DNNQLDEKYMRRLKKEKKALQDVQNVYTYQIFTESDKAGYLVRQWVASNLYDRISTRPFL
TTIEKKWIAFQILTGLRDARKKKVSHGDVKSENILVTSWNWVYITDFSSFKPTYLPLDNP
SDFAYFYDTSGRRNCYIAPERFYTTEKMPDALKRSQAIDDSTSTRVESSKKEGKVTESMD
VFSAGCVLAELFLEGTPLFTLSQLFKYRQGDFDFDQHLSPIEEDTIKDLIKRMVAIDPTI
RPTFDSLLHTSRGNIFPECFYTVIHDFISTVDDISASTPFFCTSNTSGGGVTPGQSLQAR
PTLSTMSDEKTSIGEESRDELNPLPNDSDRRIMRIWAEFDVVEPCFPPSDDMQTTAVKVD
YAVQYSSFKPIQSILPVVTCMSDQHTRSLPISSSPTNDGPALIILSLICANLRNCRLPSS
KLRALDMLLVISTYLTDEAKLDRLLPYVVDLGHDEAPIVRMAALRTSLQILAIVKAISPF
NADIFPQYILPYLRYMTTDIELSVRSVSAQGIVPFTSLAVKYLEMGQTMRAQGHFKSSEG
GQHFGESQFEISYDARLEELQDLIENQLSLLLVDQSNVVKRSVLLDIAPLCIFFGRQKTN
DVLLSHMITYLNDRDWLLRYAFFDSIVDVAACLGGRNLEEYIFPLMTQALSVLSTLTTLS
ELGLFHKMRLWELMSSTLPLMYHPNSWIRQGGIGASLFIASAAKALPTTDVWCILYPSLK
HFLRSEIRTVDVQSILKALKSPLPRHIYDFALDWAMKMGNSQFWKTPRKSSTKLDNPKEA
AIAAARKSARGAIRITLKSEEDEIHLGKLEQLGMSALEEAKLVALRDYIAKSADAVNSLR
SRQRTVIESETLQTTGTVELQKLGVVPQTVFLGSRVSQSEATYRFSVSDRYSLSRVSSND
PAGGGAPFEDLRRRLATINGSNTSLNSAGRERPMPLRLPSAVQELPPSVPMRPGSPTESV
VSTTNSVSIRPRFSIGSVEGVKAAPAVGSVRTNAMGLLEAPGRTMVEVERDQSGLTSPTS
FGNMARGSRSPVPLISEDGQDTAVNTFLEHVYSDMNREAQVDFGPRVHEGPVRRRNTTRQ
SFTARDSNRRNVEATLIAHLNSHSDAVNGIAVSPDHLFFVSCSDDKTVKVWDTARLERNV
TSKPRHTYGQHHARVKCVCILEGHHAFASAADDGSLHVIRVHVHQGSSMPKYTKLQVVRE
YRVERPSEYIQCMMHYNSDSLSNLIFATNRSSIVLMDLSTMRTLLTMENPRHHGPIVSFC
LDRKRTWLVAAALSGMLSLWDLRFGLLLRTWSVGTSIGNGRPVRIRQCVLHPSKGRGRWI
MVALDGVEALQDQPGTVLIEVWDVEKAVLVEWFISANASSANAASELAPSLTKPVEAVIA
ESSPAAAIASLVRARQNGEPSPAMPFGDTTGQQIANQVSNEPSRTVTSMVAGVDFGGYTG
STRSFVDLSMDVERTGRSGSKLGFLVVGSEDCSVKLLDLERFDRSVVLSERDEDQDRMSF
SSVSKDGVTLYVETPSSNSPPHAGAGQRASLIMSHQSNLLRAHQDCVRAVACLDAPFRGG
ILTGDRAGVIKVWRVEGVAESGGTSYG
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacaatcagtcaagcgcgatagtttcaagaaccggaggcgcactcgacacattt
gtctcggaattgggtccagatattatatatgacaagagcttagggtcctcgcgtttcctg
aagaccgtacgctgtcgccacagaaatggcttcctcgtggcaaagatatatgtcaagccc
gacaacaatcagttagatgagaaatacatgcgccgtctgaaaaaggaaaagaaggcgctg
caggacgtgcagaacgtgtatacatatcagatcttcaccgaatcggacaaggcaggatat
ctcgtccgtcagtgggttgcgagtaacttgtacgatcggatcagtactcgtccatttctt
acaactattgaaaagaagtggatcgcttttcaaatactgactggtctgcgggacgctcgc
aagaagaaagtctcacacggagatgtgaagtcagagaacattcttgtcacgtcctggaac
tgggtttacattaccgacttctcatcgttcaaacccacatatctgccgctcgataatccc
tctgacttcgcttacttctatgatacttccggccggcggaactgctacattgcccctgag
cgtttctacacaaccgagaaaatgccggatgccctgaaacgcagtcaagccatcgatgac
tctacttcgactagggttgagagtagcaagaaggagggaaaggtgaccgaatccatggat
gtgtttagtgcaggctgtgttctggcagagcttttcctcgaggggacgcctctattcacc
ctgagccaactcttcaaatatcgtcaaggtgactttgactttgaccagcatttatctcca
attgaggaggatacaatcaaggacctcatcaagcgtatggttgcaatcgaccctactatc
cgaccaacatttgattcacttttgcatacttcccgcggaaacatattcccagagtgcttc
tacaccgttatccatgacttcatatcaacagtcgatgatatttccgcttctactcctttt
ttctgtacttcaaatacctcaggcggaggcgtgactccgggacagagtttgcaggcccgg
ccgaccctgtctaccatgtctgatgaaaaaacatcgatcggggaagaatcacgcgatgag
ctgaatcctctaccgaacgactcggatcgaaggattatgcgaatttgggcagaattcgat
gttgtcgagccgtgcttccctccgagtgatgacatgcaaactaccgccgtcaaggttgat
tatgcggtccaatactcttctttcaagcccatacagagcatcttgcctgtcgtgacttgc
atgtcggaccagcatactcgctccctacctatatcaagttctccaaccaacgatggccca
gcattaatcattttatctcttatctgtgcaaatctgcgaaactgtcgcttgcctagctca
aagttgcgggctctagacatgctcctagttatctcgacctaccttacggatgaagcaaaa
ctggatcgacttctgccttacgttgtggaccttggccatgacgaggctcctatagttaga
atggcagctctaaggacgtctttgcagattctcgcaattgttaaagccatttcacctttc
aatgccgacatattccctcaatatatcctgccctacctgcgctacatgacaaccgatata
gagttgtctgtaaggagtgtctccgcccagggaatagtcccgtttaccagcctggcggtc
aagtatctcgagatggggcagacaatgcgcgcccaaggacatttcaagagttcggaagga
ggccagcattttggggagtcgcaatttgagatatcttacgatgctcgattggaagaactc
caggatcttatagagaaccagttgtcccttctgcttgttgaccagagcaatgtggtcaag
cggtccgtactcttagatatagcaccactatgcatctttttcggacgccaaaagacaaac
gatgtgctcctaagccacatgattacctacctcaacgaccgggactggctactgagatat
gcgttcttcgacagtatcgttgatgtcgcggcgtgcttgggcggtcgtaatctcgaggaa
tacatttttccgttgatgacgcaggcactttcagtcttatccacgctgacaactctgagt
gaacttggactcttccataaaatgcgtctgtgggaactcatgagctctacgctaccactc
atgtatcacccgaacagctggatacgacaaggtggcataggagcatctttgttcattgca
tccgccgccaaggcactgccaactacggacgtatggtgcatcctctatccttccttaaag
cacttcttacggtctgaaatccgtactgtggatgtgcaatcaattctgaaagctctaaag
tctccactcccgaggcacatatacgacttcgcattagattgggcgatgaagatggggaat
tctcaattctggaagacacctaggaagtcgtcgacaaaacttgataatccaaaggaagca
gctattgctgcggctaggaaaagcgctcgaggtgcaatacggataacgctcaaatccgaa
gaggatgaaattcacttgggtaaactggagcagctcggcatgtctgctttggaagaagcc
aagcttgtggctcttcgagattatatagcgaagtcggccgacgcagtcaatagccttcga
tctcgacagaggactgtaattgaatctgaaacgcttcaaaccactggaacggtcgaattg
cagaagctcggggtcgtaccgcagacagtattcctaggctctcgcgtatcccagagtgaa
gcgacataccgtttctccgtctccgacaggtacagcctttctcgtgtatcaagcaatgat
ccagccggcggaggggctcctttcgaagatcttcgccgccgcctggcaacgatcaatgga
tccaatacatcactcaactcagcaggacgggaacggcctatgccactgcggcttccatca
gcggtccaagagcttcctccttcagttcctatgaggccgggtagcccgacggaatctgta
gtctcgactacgaactctgtcagtattagacctcggtttagtattggctctgtggaaggt
gttaaggctgcacctgccgtcggatctgttcgaacgaacgctatgggtcttcttgaagca
ccgggtaggacaatggtggaagtggagcgcgaccagtctggtcttacttctccaacatcg
ttcggaaacatggcacgcggatcccgaagtcccgtcccacttatttcagaagatggtcaa
gatacagcagttaatacgttcctagaacacgtctacagtgacatgaatagggaagcacaa
gtcgattttggtccccgcgtccatgaaggtccagtaagaaggcgcaatactactcgtcaa
agcttcaccgcaagggattccaacagaagaaatgttgaagcaacactcatagcccacctt
aattctcacagtgatgctgtgaacggcatcgcagtatcaccagaccatcttttcttcgtt
tcgtgctcagacgataagactgtcaaagtctgggatacggctcggttggaacgaaacgtc
accagtaaaccaaggcatacgtatggacaacatcacgcacgggtgaaatgtgtctgtata
ctggaaggccaccatgcttttgcaagcgcggctgatgatggaagtcttcacgtcattcgt
gttcatgttcatcagggtagctcgatgccgaagtataccaagctgcaagtagttcgcgag
tacagagttgagaggccaagtgaatacatacagtgcatgatgcactataattccgattcc
ttgtcaaacctgatcttcgcgacgaaccgctcctccatcgtactgatggaccttagtaca
atgcgaacattattaacaatggagaaccctcgacatcacggacctatcgtctctttctgt
cttgatagaaaacgcacatggctagtggcagctgctctttctgggatgctttcattgtgg
gatctccggtttggtttattgctaaggacgtggtccgtcggtacatcaatagggaacggt
agacctgtgcgaatacgacaatgtgtacttcatccatcgaaaggtcgaggacgatggatt
atggttgcacttgacggtgtagaggcgcttcaagaccagccaggtacagtccttattgaa
gtctgggacgtcgagaaggccgtgttagtcgagtggttcatctcagccaacgcatcttca
gcaaacgccgcatcggaactagcgccgtctctcaccaaacctgtagaagctgtcattgcg
gaatccagtccagccgcagcgattgcctcccttgtcagagctcggcagaacggtgaaccc
tcaccagctatgccattcggtgatactacaggccaacaaatagccaaccaagtatctaat
gaaccatcgcgaactgtaacatccatggttgccggcgtagatttcggtggatacacaggc
tcgactcgatcatttgttgatttatcgatggacgtcgagcgaacggggcggagcggttcg
aaacttgggttccttgtagttggaagtgaggactgtagtgtgaaactactcgatctcgaa
cggtttgatcggtctgttgtgttgagcgaacgggatgaagatcaggatcggatgagcttc
tcctccgtttcgaaagacggcgtcacgctatacgtcgagaccccttcctcaaacagtcca
cctcacgcaggagccggtcaacgcgcctcactcatcatgagccaccaatcaaacctcctc
cgcgcacaccaagactgtgtacgcgcagttgcttgcttagacgcgccgttccgaggtggg
atattaactggtgaccgagcaggtgtgattaaagtgtggcgtgtggagggtgtggctgag
tcgggtggaacgtcatatggttag
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integrated database retrieval system
