Fomitiporia mediterranea: FOMMEDRAFT_124612
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Entry
FOMMEDRAFT_124612 CDS
T03132
Name
(RefSeq) pre-mRNA-processing protein 45
KO
K06063
SNW domain-containing protein 1
Organism
fme
Fomitiporia mediterranea
Pathway
fme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOMMEDRAFT_124612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_124612
Spliceosome [BR:
fme03041
]
Complex B
Other components
Prp19-related factors
FOMMEDRAFT_124612
Complex C
FOMMEDRAFT_124612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
18671320
NCBI-ProteinID:
XP_007267681
JGI:
Fomme1_124612
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MAALASFLPNPVYAPTVSDDEDEQPQFVASSTTVVTRQAVPPYGKRKGWKPTSQSDYGDG
GAYPECHVAQYPLEMGKKKASSGNTLALQVDGEGNVRYDAIAQQGQREGKHVQSQFKDLV
PLSHRKDLDEAGRAMERPSEDEVAETAERTRQALEKLVTGKIKSAQVKNVPDGQGKSSFI
RYTPGQQGGSNGLKQRIIKMTEVAEDPLEPPRFKHKKIPRGPPSPPPPVLRSPPRKATAQ
EQKEWMIPPCISNWKNNKGFTIPLDKRLAADGRGLQDVHINDNFAKFSEALFVADRHARE
EVRQRALMQQKLAQKEKEAKEEHLRSLAQRAREERSGIPARPTAVSTTAMKTGLAGYGSD
NESGSASEAESDRGGRRSEEDEDSAEDEEARQVRDEMRSAKRREREREMRMSNMGTEQRA
KMLARQQNRDISEKVALGLAKPTMSKESMLDSRLFNQESLASGFADDDAYNLYDRPLFHG
STAAAAIYKAHGNMAEGNEDSFGGGTEEGIGKALDNDRFGLGKARVGFEGAEDQEVREGP
VQFEKDTTADVFGVDEFLDEAKAGKKRGLDTSAGGARKRQQLERASERE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctcgcttcattccttcctaacccagtatatgctccgactgtctccgatgat
gaggacgagcaaccacaatttgtcgcttcttcaacaactgttgtgaccagacaggcagtc
ccaccgtacggcaaacgaaaaggctggaaaccaacgtctcagtcagactacggcgatggt
ggtgcctatcctgaatgccatgtcgcacagtatcctctcgaaatgggcaaaaagaaggct
tcctccgggaacacacttgcattacaagtcgatggtgaaggaaacgtacgctatgatgct
attgcacagcagggtcaacgcgagggcaagcacgtacaatcacaattcaaggatcttgta
ccactttcacaccggaaagacctcgatgaagccggacgtgctatggagcgcccttcagag
gatgaggtggcagaaactgcagaacgtacccgccaagcactagagaagctcgtcaccgga
aagatcaagtccgcacaagtgaagaacgttcccgatggccagggaaaatcgtcgttcatt
cggtacactcccggccagcaaggaggctccaatggacttaagcagcgtatcatcaaaatg
actgaggttgcggaggaccctctcgaaccgcctcgcttcaagcacaaaaagattcctcga
ggtccaccgagtcctccacctcctgttctgcgtagcccgccgcgaaaagccacagcacag
gagcaaaaagaatggatgatcccaccgtgtatctcaaattggaagaataacaagggtttc
actattccattagacaagcgtcttgccgcagacggccgtggtcttcaagatgtccatatt
aacgataactttgctaaattctctgaagcgctcttcgtcgcagaccgacatgcgcgagaa
gaagtaagacagcgtgctcttatgcaacagaagcttgcgcagaaagaaaaggaggcaaag
gaggagcatttgcgatctttggcacaacgagcccgagaagaacgctcaggaatccctgcc
cgaccaactgcagtgtctaccactgctatgaaaacaggtttggctggatatggcagcgac
aacgaatcaggttcggcatccgaagcggaatctgaccgaggagggagacgcagtgaggag
gacgaagacagcgcagaagacgaggaagcacgtcaagttcgtgacgagatgcgctcagcg
aagcggcgcgaacgtgaacgtgagatgcgtatgagtaatatgggtacagaacaacgtgcg
aagatgcttgcgcgtcagcagaatcgcgacatttctgaaaaagttgcacttggacttgcg
aagccgacaatgtcgaaggagtcgatgcttgactcgcgattgttcaaccaagagagtcta
gcgtccggttttgcggatgacgatgcgtacaacttgtatgacaggccgcttttccacggt
tcgacggcagcagcggcgatttacaaagcgcacgggaatatggcggaggggaacgaagac
tcatttgggggcggcacggaagagggtatcgggaaagcgcttgataatgatcggttcgga
cttgggaaggcgcgtgtcggattcgagggtgcagaggatcaggaggtccgagagggtcct
gtgcaattcgagaaggacacgactgccgacgtatttggcgtggacgagtttttggatgaa
gcgaaagccggcaagaagcggggacttgacacttcagctggtggagctcgcaaacggcag
cagctcgaacgggcatcggagcgagagtag
DBGET
integrated database retrieval system