Fomitiporia mediterranea: FOMMEDRAFT_124682
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Entry
FOMMEDRAFT_124682 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K14300
nuclear pore complex protein Nup133
Organism
fme
Fomitiporia mediterranea
Pathway
fme03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FOMMEDRAFT_124682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_124682
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_124682
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
FOMMEDRAFT_124682
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
FOMMEDRAFT_124682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
18671322
NCBI-ProteinID:
XP_007267729
JGI:
Fomme1_124682
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MDVDAGPSLSETRIRSEVVFAQSEEQKVSLVSQLPAEVLQVLRNTDFVSNTFIGDVDTRN
SFCLIASTKTCFVWKYSQLLPGAPTCYIFPCPNRFSETEPAVPSSALVSYGSSREPGLIL
VSPYGELHFWDSIGLGLTGGEATDASLLDLRSDETVTTLIYAEPLKFVATTSTGRLFLLS
ITSTEGRFRVASHPFTLTRPQGTMERLRSGFWGEKPPSYSGGFITAASVTDVNDEGFEVW
ICADMKVVRWTVLYKGWEQFEAEEDIEQKLLPPLEEAFKVTSGALSDLELLDIAFDAEDH
LVLLASFSAGVDNESSIDTRPRRHYVVVRMKREDNMQFAGIRTVPYQTISSDRANIHPRL
RLLDGGRVYCVQFGDAVALAARDNNYTSLLTLKNLQDRTFGCGVLNNSSDMLFMNSDVLM
RVSTDIEKINSYNVNTWKGTSIKSIMTQAILFGSNPKNPLLFTFPPDVDEESLISGAEQL
SRAVLASDAEVVRPNPDLSQQIRERKDRLRFLIGFINENGALGKMSQTSRQRLVVDAEKL
HATQELWILYCELLNSGLDDHILLDAINAYMEESDKSRHDDVMRAFLRLETRDIGNLLPY
IKHEVGEIIRDYNLAQQTPDALYRGTDYVLCILESAWSFRDLNMGIYGVVGPMLNPWTSS
PAVIDIVLDFFNLSDRLLIQTPPEAENKISQDTRRQLPRLGATVFRCFQERQNWLESAVA
ADETGIESEKRAHREHFQQVRPQILQTLFKHGKSEDAFVLAENYRDFRSLVDLCHSTPPI
YPFASNVNAERIKEYIEKYKEEFTDELYLWYVEHGEVRCLFEQSETYGEYIDAFFIKHPY
PNVSWVHDIGKGRWGSASSTLLTQVDRTLDLETRHVMLSIGKLSQIAESEKSQTRSDTIL
DAFHDGLDYVSVHDKLIEELRAPLAGSKQRQSLENQADAIMKAVAPALKPKTYSGFHSEF
KASVKEVLQNHALRVEDLIDILTLKESTLDFETALALIKNAKNLPEARQLSCFRTIWRRI
YIHDDWARLTKTVNVTDTQLVERFRKTALYATVRDTFRRLRFEQGTPSNPDDLLTTPNIV
LPVNEAAQLPSREELESRWPGHTDEQIEALSNDYANERQRLVEFDLVPVVERVKELAVQE
LKEEFEVEDIAMNLSV
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgacgcaggtccgagtctaagtgagacgaggatacgttcagaggttgtgttc
gcgcaatccgaagaacaaaaggtgtccttggtttcacaactaccagcggaagtgctccag
gttctaagaaataccgacttcgttagcaacactttcatcggagacgtagacactcgcaac
tcgttctgtcttattgcttctaccaagacgtgctttgtttggaaatactcgcagcttctt
cctggagcgccgacatgttacatctttccttgtccaaaccgcttctcagaaacagagcct
gccgtaccgtcttctgcactcgtgtcatatggttcctcgcgtgaacctgggttaatctta
gtctctccttatggagagttgcatttctgggacagtatcggtcttggccttaccggcggc
gaagcaacagacgcttcgttattagaccttaggtctgacgagaccgttactacgctgata
tacgcagagccactgaaatttgtagcaacgacatcgaccggacggctattcctgctttca
atcacatcgactgaaggacgctttcgcgtagcatcgcatccatttaccttaactcgtcca
caaggtacaatggagcgattgcgttcaggcttctggggcgaaaaaccaccatcgtactcg
ggcggctttataacagctgcaagtgtgaccgatgtaaatgacgaaggattcgaagtttgg
atatgtgcagacatgaaagttgtccgctggactgttctctataagggctgggaacaattc
gaagccgaggaagatatagaacagaagctcctgccaccgcttgaagaggccttcaaagtc
acttccggagcactatctgacttggagcttttggatatcgcttttgacgccgaggatcat
ctagtgttgcttgcttcgtttagtgctggagtagacaatgagtcgagtatcgatacacgg
ccgcgtcggcattacgttgttgtcagaatgaagagggaagataacatgcagtttgcgggt
attcgcaccgtgccgtatcaaacaatatcttcggaccgagcgaacattcatcctcgctta
cgtttactcgacggcggtcgggtatactgtgtgcagttcggagacgcagtcgcccttgca
gctagagataataattacaccagcctccttaccctcaagaatctccaggacagaacattc
ggctgcggcgtcctaaacaactcttctgacatgctcttcatgaatagcgatgtgctcatg
cgcgtctctaccgatatcgagaagattaacagctataatgtgaatacatggaagggcacc
tcaatcaagtcgataatgacacaagctattctatttgggtcgaatccaaagaaccctctt
cttttcaccttccctcccgatgttgacgaggaaagtctaatctctggagccgagcagcta
tctcgagcagtactcgcttcagatgccgaagttgtgagacccaatcctgacctctctcag
caaattcgagaacgcaaggaccgccttcggttcctcattggttttattaatgagaacggc
gcacttggaaagatgtcgcaaacaagccgccagcgtcttgttgtagacgctgaaaaacta
catgcaacacaagaattatggatattgtactgtgagctcctaaattctggactcgacgat
cacatactgctcgatgccattaacgcatacatggaggaatcagataaatcacgccatgat
gatgttatgcgtgcattcctccgcctagagactcgagacattggaaaccttcttccttac
atcaaacatgaagtaggagagataatcagggactacaacttagcacaacaaacccctgat
gccttgtatcgagggacagattacgtgctctgcatcctagaatccgcatggagtttccgc
gacttaaatatgggtatatacggcgttgtggggcctatgttgaacccttggactagctca
ccagctgttatcgatatcgttcttgacttctttaacctgtcggatcgactccttatccag
acgccccctgaagcggagaacaagatttctcaggatacgcgtagacagcttcctcgacta
ggtgcgacggtgttccgttgtttccaggagcgacagaattggctcgaaagcgcggttgct
gctgacgaaactggcatcgaatccgagaaacgtgcccaccgggaacatttccagcaagtt
cgcccgcaaatactgcaaacattattcaagcacggcaaatcggaggatgcgttcgtcctt
gctgaaaactatcgagatttcaggtcactcgtggacctatgccactccactcctccgatt
tatccatttgcaagcaatgtgaacgcagagcggatcaaggagtacattgagaagtacaaa
gaagagttcaccgacgagttgtacctgtggtacgtcgaacatggtgaagtacgatgctta
ttcgagcaaagtgagacgtacggcgagtacatcgatgcgttcttcataaaacatccgtat
ccgaacgtgtcgtgggtgcatgacattgggaagggtcgatggggatctgcgtcgtcgacg
ttgcttacgcaagttgatcgtacgttagaccttgagacgcgacatgtcatgttaagtatc
ggcaaattatcacaaattgcggagagtgaaaagtcacagactcgttcggacactatacta
gatgctttccatgacggcctcgactatgtctccgtacatgacaaactaatcgaggagctg
cgcgcaccgttggcggggtcaaaacagagacaatcgctcgagaaccaagcagacgcaatc
atgaaggcagttgctccggctttaaagccaaagacgtattcaggtttccattcggagttc
aaagcttctgtgaaagaagttctgcaaaatcatgcattgcgtgtagaggacttgatcgat
atcctgacgttgaaagagagcacgcttgatttcgaaactgctctcgcacttattaaaaat
gctaaaaacttacccgaagctcgccaactttcttgcttccgaacgatctggcgacggata
tacatccacgatgactgggcgagactaaccaaaacagtcaacgtaacagacacgcagctc
gtcgagcgtttccgaaagacagcattatacgcaacagttcgagatacattccgccgatta
cgtttcgagcaaggcacaccttcaaacccagatgacctgctaaccacaccaaacatcgtc
ctcccagtaaacgaagcagcgcaattacccagtcgtgaggaactggaaagccgatggccg
ggacatacagacgagcagatcgaggctctttcgaatgattatgctaatgaaagacagcga
cttgtagagttcgaccttgtgcctgttgttgagcgtgtgaaggagcttgcagtgcaggag
ttgaaggaagagttcgaggtggaggatattgctatgaatttgagtgtatag
DBGET
integrated database retrieval system
