Fomitiporia mediterranea: FOMMEDRAFT_124851
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Entry
FOMMEDRAFT_124851 CDS
T03132
Name
(RefSeq) UFD1-domain-containing protein
KO
K14016
ubiquitin fusion degradation protein 1
Organism
fme
Fomitiporia mediterranea
Pathway
fme04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FOMMEDRAFT_124851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_124851
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FOMMEDRAFT_124851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
18671333
NCBI-ProteinID:
XP_007267823
JGI:
Fomme1_124851
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MNMFGGDDPFDGHGAAGLFAQLAQGFPGGFGPNRRSARSYDEYMKAYSVALLPGNERTNL
SYGGKIIMPPSALANLTNLDLESPWMFKLSNPANPAASTHAGVLEFIAEEGCVHLPYWMM
KTLNLNEGDPIRITGAELPKGQFVKLQPQAVHFLEISDPKAVLEHALRNFSALTQGDIIA
ISYNSIVFDFLVMESQPGGEGINIIDTDLEVDFAPPVGYKEPERPKAAPPPTMASKLKID
LGESSPGSSRPPSSLSGAFAGTSTGETTLSKGGEVWESFKGKGETLNGRKTKGRGISQRG
IENLQEGSKVFRTDKRRIVTNDTLDTDTYTPAALNLPHGKLFFGFKHIPYNVPDDHTVVN
GSGPSTSTSIGGETSSFSGSGNTLSGRTLGNSSTPSANAKGKGKEKEEEDERSSDQNQQP
NLNNTHGWGRGQTLSSAASRRLADDGPVGAGGARVPRPSARSVNKQVVEREPSPEMDWGV
DSDEEPIYVDSD
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgtttggaggagatgacccgttcgacggccatggagctgccggtttgtttgct
cagctcgcacaaggatttccgggtggctttggtcctaataggcgatcggcacgatcgtac
gacgaatatatgaaagcatacagtgtagctttgttacctggaaatgagcgtacgaatttg
agttatggagggaagattatcatgccaccttctgcacttgcgaacttgacaaatttagac
cttgagtcgccctggatgttcaagcttagcaatcctgctaaccctgctgcctcgacgcac
gcaggtgtgttggagttcatcgctgaggaaggatgtgtccacctaccatattggatgatg
aagactctcaacctgaacgaaggagacccgattcgcataactggggctgagctaccgaag
ggtcaattcgtcaagttacaaccgcaagctgtacatttcttggagatctcggacccaaag
gcagtactagaacatgcattacgaaatttctctgcattaacacaaggcgatatcatcgcg
atcagctacaattccattgtctttgacttcttagtaatggagtcacaaccaggtggcgaa
ggcataaacattatcgacacagatcttgaagtggactttgcgcctccggtggggtacaag
gagcctgaacgacccaaggctgcgccaccacctacaatggcgtcgaagctcaagattgat
ttgggtgaatcgtcaccagggtcgtcgaggccaccgtcttcattgtctggcgccttcgct
ggaacgtcgacgggtgagacgactctgtcaaagggcggtgaggtttgggaaagctttaaa
ggaaagggtgagacgttgaatgggaggaaaacgaagggacgaggtattagccagagaggc
attgagaacttgcaggaggggagcaaagtctttcgaactgacaagcgaagaatcgtaacg
aacgacacgttagatacggatacgtacacaccagcagctttaaacctcccacacggaaaa
ctcttcttcgggttcaagcatataccgtataacgtcccggatgaccacacggtcgtcaac
ggttcaggaccttcaacttccacctcaataggaggtgagacgtcaagtttctcaggaagt
ggaaatacactatcaggacgtacactcggtaactcttccactccctcggccaacgcaaaa
ggcaaggggaaagaaaaagaagaggaagacgagagatcttcagaccaaaatcaacaaccc
aacttaaataatactcatggatggggaagaggccagacgctcagctccgccgcgtcacga
cgattggcagatgacggacctgttggtgctggaggtgcgcgtgtaccgaggccttctgcg
aggagtgtgaataagcaggttgtggagagggagcctagtcctgagatggattggggagtt
gattcggatgaggagccgatttatgttgatagtgattag
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integrated database retrieval system