KEGG   Fomitiporia mediterranea: FOMMEDRAFT_125508
Entry
FOMMEDRAFT_125508 CDS       T03132                                 
Name
(RefSeq) Nop domain-containing protein
  KO
K12844  U4/U6 small nuclear ribonucleoprotein PRP31
Organism
fme  Fomitiporia mediterranea
Pathway
fme03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FOMMEDRAFT_125508
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fme03041]
    FOMMEDRAFT_125508
Spliceosome [BR:fme03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    FOMMEDRAFT_125508
SSDB
Motif
Pfam: Nop Prp31_C
Other DBs
NCBI-GeneID: 18671363
NCBI-ProteinID: XP_007268239
JGI: Fomme1_125508
LinkDB
Position
Unknown
AA seq 481 aa
MQDAGTGLVLEGGVRPAAELDAEEVQQLELAGVEDVRKVAKLEGTKRMTDILKEIERYTE
NPSSAETMSLPPHLNPEYTIIVQANNLSVDVDNEILVVNKFIRDHYAPKFPELEQLVPDP
TMFIRSVRALGNSDDPKKVDLSGVLPQAAIMSVHIAASTSSGKKLAESEWLAVQNACDLA
DRLEEARKKASKIFSYVSSRMNMLAPNLSAIVGTTIAAKLLGVAGGLSALAKMPACNVHL
LGAQKKIAAGFSSVTQNRHTGFVFQSEIIQQTPPDYRLKVQRTVGAKCVLAARMDLERRH
RDGSYGEELREKIDKHVDRLAAPPPAKVVKPLPIPNDGPKKRRGGRRARKTKEAYAQTEL
RKLQNRMAFGEAEEEVGAFDQTKGMGMIGVASGRVRAGMGEARSKAKMSKANKLRTAAIT
RSAQQSSGTATSLVFTPVQGFEITNHAAAAQRVKEANEKWFAKGMFSFAGQKGGASSSSN
T
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgcaggacgctgggactgggttggtcctggaaggcggcgtgaggcctgcagcagagtta
gatgccgaggaggtccagcaactagagcttgcaggtgttgaagatgtccggaaggtagcg
aagctagagggtacaaagcggatgacagatattctcaaagaaattgagcgttacacggaa
aaccctagctctgcagaaacgatgtctctacctccgcatctcaatcccgaatataccatt
atcgtacaggcgaacaacttgtccgttgacgtcgataacgaaattctagtcgtgaacaag
ttcatccgagatcattatgcccccaagttcccagagctcgagcagctcgttcccgaccca
actatgttcattcgctctgtgcgcgccttaggcaattcggacgacccaaagaaggtcgac
ttatccggcgtcttacctcaagcggcgattatgagtgtccatattgcggcgtcaacaagc
tcgggcaagaaattggctgaaagcgagtggctcgcggttcagaatgcgtgtgacttggcg
gatcgacttgaagaagcgcggaagaaggcaagtaaaatctttagctacgttagttcgcgt
atgaacatgcttgctcccaacctttcggctatcgtaggaaccactattgcggcgaaacta
ctcggtgtcgcaggaggcctaagtgctctggcaaagatgcctgcctgtaacgttcacctc
cttggtgctcaaaagaaaatcgctgcaggcttttcgtcagtcacccaaaacaggcataca
ggattcgtgttccagtcggagattatacaacagacgcctcccgattatagactaaaagta
cagcgaaccgtcggtgcgaagtgtgtcttggccgcgaggatggacctagaacgtaggcat
agagatggcagttacggggaagaactccgagagaagatagacaagcatgtagataggctt
gcagcgccgcctccagcaaaggtggtgaagcctttacccattcctaacgatggaccgaag
aagcgacgcggtgggagacgggctcggaagaccaaggaagcttacgcacagacggagctc
cgaaagttgcaaaaccgcatggcgttcggcgaagctgaggaggaagtcggtgcgttcgat
cagacgaagggtatgggtatgattggtgtcgcgagtggcagagtacgtgctgggatgggc
gaagcacggagtaaagccaaaatgtcaaaggcaaacaaattacgaacagctgccatcacc
cgttcagctcaacagtcgtcgggaacggcgacttcgttggtattcacgccagttcaaggt
ttcgagattacgaatcacgctgctgccgcccagcgtgtaaaggaagcgaacgagaaatgg
ttcgccaagggtatgttctccttcgcagggcaaaaaggtggtgcctcgtcatcaagcaat
acgtga

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