Fomitiporia mediterranea: FOMMEDRAFT_125508
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Entry
FOMMEDRAFT_125508 CDS
T03132
Name
(RefSeq) Nop domain-containing protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
fme
Fomitiporia mediterranea
Pathway
fme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOMMEDRAFT_125508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_125508
Spliceosome [BR:
fme03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
FOMMEDRAFT_125508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
18671363
NCBI-ProteinID:
XP_007268239
JGI:
Fomme1_125508
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MQDAGTGLVLEGGVRPAAELDAEEVQQLELAGVEDVRKVAKLEGTKRMTDILKEIERYTE
NPSSAETMSLPPHLNPEYTIIVQANNLSVDVDNEILVVNKFIRDHYAPKFPELEQLVPDP
TMFIRSVRALGNSDDPKKVDLSGVLPQAAIMSVHIAASTSSGKKLAESEWLAVQNACDLA
DRLEEARKKASKIFSYVSSRMNMLAPNLSAIVGTTIAAKLLGVAGGLSALAKMPACNVHL
LGAQKKIAAGFSSVTQNRHTGFVFQSEIIQQTPPDYRLKVQRTVGAKCVLAARMDLERRH
RDGSYGEELREKIDKHVDRLAAPPPAKVVKPLPIPNDGPKKRRGGRRARKTKEAYAQTEL
RKLQNRMAFGEAEEEVGAFDQTKGMGMIGVASGRVRAGMGEARSKAKMSKANKLRTAAIT
RSAQQSSGTATSLVFTPVQGFEITNHAAAAQRVKEANEKWFAKGMFSFAGQKGGASSSSN
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgctgggactgggttggtcctggaaggcggcgtgaggcctgcagcagagtta
gatgccgaggaggtccagcaactagagcttgcaggtgttgaagatgtccggaaggtagcg
aagctagagggtacaaagcggatgacagatattctcaaagaaattgagcgttacacggaa
aaccctagctctgcagaaacgatgtctctacctccgcatctcaatcccgaatataccatt
atcgtacaggcgaacaacttgtccgttgacgtcgataacgaaattctagtcgtgaacaag
ttcatccgagatcattatgcccccaagttcccagagctcgagcagctcgttcccgaccca
actatgttcattcgctctgtgcgcgccttaggcaattcggacgacccaaagaaggtcgac
ttatccggcgtcttacctcaagcggcgattatgagtgtccatattgcggcgtcaacaagc
tcgggcaagaaattggctgaaagcgagtggctcgcggttcagaatgcgtgtgacttggcg
gatcgacttgaagaagcgcggaagaaggcaagtaaaatctttagctacgttagttcgcgt
atgaacatgcttgctcccaacctttcggctatcgtaggaaccactattgcggcgaaacta
ctcggtgtcgcaggaggcctaagtgctctggcaaagatgcctgcctgtaacgttcacctc
cttggtgctcaaaagaaaatcgctgcaggcttttcgtcagtcacccaaaacaggcataca
ggattcgtgttccagtcggagattatacaacagacgcctcccgattatagactaaaagta
cagcgaaccgtcggtgcgaagtgtgtcttggccgcgaggatggacctagaacgtaggcat
agagatggcagttacggggaagaactccgagagaagatagacaagcatgtagataggctt
gcagcgccgcctccagcaaaggtggtgaagcctttacccattcctaacgatggaccgaag
aagcgacgcggtgggagacgggctcggaagaccaaggaagcttacgcacagacggagctc
cgaaagttgcaaaaccgcatggcgttcggcgaagctgaggaggaagtcggtgcgttcgat
cagacgaagggtatgggtatgattggtgtcgcgagtggcagagtacgtgctgggatgggc
gaagcacggagtaaagccaaaatgtcaaaggcaaacaaattacgaacagctgccatcacc
cgttcagctcaacagtcgtcgggaacggcgacttcgttggtattcacgccagttcaaggt
ttcgagattacgaatcacgctgctgccgcccagcgtgtaaaggaagcgaacgagaaatgg
ttcgccaagggtatgttctccttcgcagggcaaaaaggtggtgcctcgtcatcaagcaat
acgtga
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integrated database retrieval system