Fomitiporia mediterranea: FOMMEDRAFT_125540
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Entry
FOMMEDRAFT_125540 CDS
T03132
Name
(RefSeq) RNA-binding domain-containing protein
KO
K12897
transformer-2 protein
Organism
fme
Fomitiporia mediterranea
Pathway
fme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOMMEDRAFT_125540
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fme01009
]
FOMMEDRAFT_125540
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_125540
Protein phosphatases and associated proteins [BR:
fme01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
FOMMEDRAFT_125540
Spliceosome [BR:
fme03041
]
Common components
Common spliceosomal components
SR proteins
FOMMEDRAFT_125540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
18671366
NCBI-ProteinID:
XP_007268255
JGI:
Fomme1_125540
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MRGGRSPPPAYRSRRSPPPSRPKHAPVQNPQPSNVLGVFGLSIRSTERDLDEEFSRFGRV
EKVTIVYDQRSDRSRGFGFIKLASVEDAARCIQELNGVELNGRRIRVDYSVTERPHAPTP
GEYMGHRRNTGRDYDRRDRGPYRESYRERDIRRDYDERDRYYDRERYDRYDRYSDKDRYS
DRGRDRDPYGRDRDWRHRSPAPVGRYGSDRHRRSYSRSPPRGSSPARIRDYDIPPASAAA
LNGDPRW
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtggtcgcagccctccaccagcttaccgtagcagaaggtctcctccgccctca
aggccgaagcacgctcccgtgcagaaccctcagccctcgaacgtgctcggtgtcttcggg
ttgagcattcgaagcacagaacgtgacctcgacgaagagttcagtcgattcggtcgcgtt
gaaaaagtgaccattgtctatgaccagcgttctgacaggtctcgtggattcggcttcatc
aagcttgcctcagtcgaagatgccgcccgttgcatccaagagttgaacggcgttgaactc
aatggccgccgtattcgcgttgactactctgttactgaacgtccccatgctccaacgccg
ggcgaatatatgggtcatcgtcgcaacacaggtcgggactatgaccgccgtgaccgtggc
ccgtaccgtgaatcgtaccgggagcgcgacattaggcgcgactacgatgaacgggataga
tattatgatcgtgagcgctatgaccgctacgatcgctattcagataaagaccggtactca
gacaggggtcgggatcgcgacccatacggacgagaccgagactggcgtcaccgcagccca
gctccagttgggcgctacggttctgaccgccatcgccgcagctacagccgtagcccaccc
cgtggaagtagccctgctcgtataagggattacgacataccgccggcctccgcagccgcg
ctcaatggcgacccacgttggtga
DBGET
integrated database retrieval system
