Fomitiporia mediterranea: FOMMEDRAFT_126341
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Entry
FOMMEDRAFT_126341 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K08492
syntaxin 18
Organism
fme
Fomitiporia mediterranea
Pathway
fme04130
SNARE interactions in vesicular transport
fme04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
FOMMEDRAFT_126341
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
FOMMEDRAFT_126341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_126341
Membrane trafficking [BR:
fme04131
]
SNARE
Syntaxin (Qa)
Stx-rER
FOMMEDRAFT_126341
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
Lin0124_C
TetR_C_44
Motif
Other DBs
NCBI-GeneID:
18671407
NCBI-ProteinID:
XP_007268706
JGI:
Fomme1_126341
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MAFTDRTPQFREIVAKSSLPDAKRRKTGKAAKRGRDESDEAQTLLNKEYMREAYNILNHI
NNLSRMLSSIRRAYLAVDSTSSSFLRQPSRALEFDGSEQSWSSIRHLTNEERDQIDMQAR
IILSKCADRVKQLEALDKKRAELASADTNLLTRLLPSRLKQDSSTNSVAGRAAHNSSVTY
YLNRRLAQAGQMQKEMQEERIKRQMERTRTLGSGAAREAVSMGLGDLIPVPEPIPLAGSS
STRNWLGDAASNIASSIGLPSPSMSSTSPRPGGPTQPQPMDDEFDDDEDDDLELSASQIQ
QFESENANILRSVQDTLASVQQAEQRLMDISALQTELVTHLTKQSEITDQLYEDAISTTA
AMEKGNEQLTEAKRRAKDSRLYILVFLVGTSLALLFLHNY
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcattcacggacaggactcctcaattccgagaaatcgtcgccaagtcgtcgttaccg
gacgcgaagaggcggaagactggcaaagcagcaaaacgaggccgcgacgaatcggacgag
gcacaaacattattgaataaggaatacatgcgggaggcatacaacattttaaaccacata
aataacctatccagaatgctctcaagcattcgaagagcttacttagccgtcgactcaact
tcctcctccttcctacgtcaaccttcccgtgcactagaatttgatggctcagaacagtcg
tggtcatccatccgacatcttacaaacgaggaacgggatcaaatagatatgcaagcccgg
ataatactctcgaaatgtgccgaccgtgtgaagcagctagaggcacttgacaaaaaacga
gcggaattagcatcagcagatacgaatctccttacccgcctacttccgagtcgtttgaag
caagactcatccactaactcagtggcaggccgggcagcacataactcaagcgtgacatat
tatctcaaccgccgacttgctcaggctggtcaaatgcaaaaggagatgcaagaagaacgc
ataaagcggcagatggagcggacgcgcacgctcgggtcaggtgcagcccgagaagcagta
agcatgggtttaggtgaccttatcccagttcccgagcctatacctctggctggttcatcc
agtacgaggaactggcttggagacgctgcgtctaatattgcgtcgtcaattggacttcct
tccccatccatgtcttccacctcgcctagaccaggtggaccaactcaaccacagccgatg
gatgacgaatttgacgacgacgaagatgacgatcttgaattgtccgcgtcccagatccaa
caattcgagtcagaaaacgcaaacatccttcgctctgtgcaagacacgctcgcgtctgtc
cagcaagctgaacaacgacttatggacatcagtgctctacaaactgagctcgtcacgcac
ctcacgaaacaatctgagattacggaccaactgtacgaagatgccatcagtacgactgct
gctatggaaaagggaaacgaacagctaacagaggcaaaacgtcgcgcaaaagatagtcgg
ctctatattctcgtattcctggttgggaccagtctagctttgttattcttacataactat
taa
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