Fomitiporia mediterranea: FOMMEDRAFT_126418
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Entry
FOMMEDRAFT_126418 CDS
T03132
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fme03021
]
FOMMEDRAFT_126418
Transcription machinery [BR:
fme03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
FOMMEDRAFT_126418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
COG5_N
Motif
Other DBs
NCBI-GeneID:
18671414
NCBI-ProteinID:
XP_007268750
JGI:
Fomme1_126418
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MEVKTMNVFEHFRKSPSESFSSSRSASLKDLKDLATRPIASNSRVRRDEKYRRDMYLAFI
DNALNQKARGINEHYDDLVRQFSPTSLSAAGQAPQSADQQQLRGYLTALTHVVSKLDRAH
FSLVDAIVSMPWTTMDSAFVKTYISFVGMLVSARPEYLTLVLERAAQSLTYYSARKALDS
GFAESSSSPLTRRIVYDRVHSLVAQLLELIPTLPSALYPLLARNFPHKRQREAEHVTYIR
NLLRLSDYCPELWDRILGLVVDRTLQIDVEIQVELEELEAEGADEEPEEIFHLDLFDTII
GQEANDSDSESEDEDDGGISDLSTDAGSDSDADAQEEQMNVKHVRDMVSKLDSILEVIFK
HLDRLHSAIVAPSETLETTRSSPASNDVPSEGPNDVPVPSANPLSASTTKRQALAESHFH
ALLSIFERTILRTFKSRYTQFLIFWYSSLDTQFRDRFLGTIVSAALLEPSQPVVTRAAAA
SYVASYVSRAAFVARGETQMVVRVLCQFLETHLDEFEAYAKQAANARSSGYEVLNQQSAE
QHAVFYAAAQAMFLIFCFRWRDLTQRDENDADIEEFEDVATINGGVAHRAWMPELKAMQR
VVNSALNPLKVCSSNVVQQFARVAQRVGFIYCFSILEANRRSEYASDSKNVSASDSNPAL
WVQSFDADLTTFFPFDPFKLSRSSAYIEGIYREWASVAIDDSEDEDEDDEDHEDEVEEGE
GGEVDGTLPVDEDLHMHGPASFVSDAGGLGESFGGMSISPAQPQGIAAA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggaagttaagacgatgaatgtctttgaacactttcggaaatcaccatctgagtcgttc
tcttcgtcgaggtcggcttccttgaaagacctaaaggatttagctactcgtcctattgca
tcgaattcgcgagtacggagggatgagaaatatagaagggatatgtaccttgctttcatt
gataatgcgctgaatcagaaggctcgggggataaacgaacattatgatgacctcgtacga
caatttagcccgacttctttatcagctgctggacaggcaccgcaatcggcggaccagcaa
cagctgcgcgggtatctcactgcacttacacatgttgtgtcgaaactcgaccgcgcgcat
ttttcacttgtggatgcgattgtgagtatgccttggacgacgatggactcggcatttgtc
aagacgtatatatcatttgttgggatgcttgtcagtgctagaccggagtatcttacgctc
gtattggagagagctgcgcagagtttgacatactactctgctcgcaaagcacttgattcc
ggttttgctgaaagttcatcttcacctttgactcggcgtattgtgtacgaccgagtacac
agtcttgtcgcacagctacttgagctcatcccaaccctaccatcggctttgtatcctctc
ctcgcgcgtaactttcctcacaagcggcagcgcgaggcagaacatgtgacatatattcgc
aacctccttcgattatcggattattgcccagaattgtgggatcgcatattgggtctcgtc
gttgataggactctgcaaatcgacgttgagattcaagttgagcttgaagaacttgaagca
gaaggcgcagatgaagaaccagaggagatttttcatttggacttgttcgatacaattatc
ggacaggaagccaatgactcggactctgagtcggaggatgaagacgatggtgggattagt
gacttgtcaaccgatgcgggaagtgatagtgacgccgacgcgcaggaagaacagatgaac
gtgaaacatgtccgggacatggtgtctaaactcgatagtatacttgaagttattttcaaa
catcttgaccgcttacattcagcgatcgttgcgccttcggagacgctagagactaccagg
tcctcgccggcctcgaatgatgtaccttctgaagggcccaacgatgttcctgtgccaagc
gccaacccactctcagcatcaaccacaaaacgtcaagcacttgccgaatcacacttccac
gcacttctttccatctttgaacgcacgatccttcgcacgttcaagtcccgctacacccag
ttcctcattttctggtactcatctctcgacacgcagtttcgagaccggttcctagggaca
atcgtctctgcggcgttgctcgaaccttcacaaccagtcgtcacacgagcggcagctgca
agttatgtcgcaagctacgtaagtcgagctgcattcgttgcgcgtggagaaacacagatg
gtcgtacgtgtgctgtgccagttcctcgagacgcatctggatgagttcgaggcgtatgcg
aaacaggcggcaaatgctaggagttctggctatgaggtcctgaatcagcagagtgcggag
cagcatgctgtcttctacgccgcagcacaggcgatgttcttgatcttctgcttccgctgg
cgtgatcttacacagcgggacgagaacgacgcagatattgaggagtttgaggacgtagca
accatcaatggtggtgtcgctcatcgtgcgtggatgccagagctcaaggccatgcagcgg
gttgtaaattcggcgcttaatcctttgaaggtgtgttcctcgaacgtcgtacaacaattt
gcacgagtcgcacaacgggtggggtttatctattgtttctccattctcgaagcaaaccga
cgttccgaatatgcgtcagactcaaagaatgtctctgcttctgactctaatccagcatta
tgggttcagtcctttgatgcagacctcacgacgttcttcccgttcgatccgttcaagcta
tcgcgttcttctgcatacatagagggtatttatcgggaatgggcgtctgttgctatagat
gacagtgaggacgaggatgaggatgatgaagaccatgaagacgaagtagaagagggtgaa
ggaggtgaagttgacggtactttgcctgtcgacgaggacctgcatatgcatggtccggcg
agcttcgttagtgatgctggagggctaggcgaatcttttggagggatgagcattagtcct
gctcagcctcagggaattgcagcagcgtaa
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