Fomitiporia mediterranea: FOMMEDRAFT_126546
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Entry
FOMMEDRAFT_126546 CDS
T03132
Name
(RefSeq) cyclin-like protein
KO
K03124
transcription initiation factor TFIIB
Organism
fme
Fomitiporia mediterranea
Pathway
fme03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FOMMEDRAFT_126546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fme03021
]
FOMMEDRAFT_126546
Transcription machinery [BR:
fme03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FOMMEDRAFT_126546
Prokaryotic type
Archaeal type
TFB
FOMMEDRAFT_126546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
Cyclin_N
LacI
Motif
Other DBs
NCBI-GeneID:
18671423
NCBI-ProteinID:
XP_007268820
JGI:
Fomme1_126546
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MAYAQPFPLASPQANQLPKNVFGPDLAVRLVCPECRDPNPNIIEEFGSGDLVCGTCGLIL
GDRVVDTRSEWRTFANDEGDDPSRVGAAIDPLMEGMEQMDTVISYKDGGSGVARELQRAA
SRSQNTRSERNMLQAFRDISSWCDQFSLPKTISDIAKQLYKRADEEKLLRGKSLDAVIAA
CIFIACRQAHVPRTFREMCTLTHVPKKTLGQCYKTLEKAFNLAAAGSNNTTQNSRPDPAA
TTTNPQDLLARYCNHLGLPHLVQSTASEIISIGKEHAFTDGRSPISIASGSIYFTTQLLG
VPMTMKDLCENAGVSESTVKLVFKIYCENRDVVVKQEWLDSGKAKLDRLPPSSS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcctacgcccagcccttcccgctcgcgtccccgcaggcaaaccagctgcctaagaat
gtctttggccctgatctggccgttcgcctcgtctgtccggagtgtcgagaccctaatccg
aacatcattgaggagtttggcagtggcgacctcgtgtgtgggacttgcggtctaatcctg
ggcgaccgtgtcgttgacacgcgcagcgagtggcgtacattcgcgaacgacgagggtgat
gacccctcacgtgtcggtgctgccattgatccactaatggaaggtatggagcagatggac
acagttatcagctacaaagacggtggatcaggagtggctcgcgaattgcaaagggcagcg
tcgcggtcgcaaaatacgcgatcagagcgtaacatgctacaggcattccgcgacatctcg
agttggtgtgaccaattctcgttgccgaaaacgattagcgatatcgcgaagcagctgtat
aaacgtgcggatgaggagaagcttctgcgggggaaaagtctcgatgcagtcattgcagcg
tgcatctttattgcatgtcggcaggcacacgtaccgcgcacttttcgcgagatgtgtaca
cttacacatgtaccgaagaaaactttgggacagtgttataagacgctcgagaaagcgttt
aaccttgctgctgcgggttcgaataataccacgcagaattcacgtcctgatccagcggca
acgacgacgaacccgcaggatcttcttgcacgttattgcaatcatcttggtctgccgcac
ttggtgcagtcgactgcttcggagatcatttcgatcggaaaggagcatgcattcacggat
gggcggagtcctatctcgattgctagtggctcgatttatttcactacgcagctcctcggg
gtaccgatgacgatgaaggacctctgtgagaatgctggtgttagcgagagtaccgttaag
ctggtattcaagatatattgtgagaatagagatgtggttgtgaagcaggagtggttggat
tctggcaaggctaagcttgataggctgcctccgtcgtcgtcgtag
DBGET
integrated database retrieval system