KEGG   Fomitiporia mediterranea: FOMMEDRAFT_126875
Entry
FOMMEDRAFT_126875 CDS       T03132                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
fme  Fomitiporia mediterranea
Pathway
fme03082  ATP-dependent chromatin remodeling
fme03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    FOMMEDRAFT_126875
   03083 Polycomb repressive complex
    FOMMEDRAFT_126875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fme03036]
    FOMMEDRAFT_126875
Enzymes [BR:fme01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     FOMMEDRAFT_126875
Chromosome and associated proteins [BR:fme03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     FOMMEDRAFT_126875
   HDAC complexes
    Sin3A-HDAC complex
     FOMMEDRAFT_126875
    BRAF-HDAC complex
     FOMMEDRAFT_126875
    REST complex
     FOMMEDRAFT_126875
    SHIP complex
     FOMMEDRAFT_126875
    MiDAC complex
     FOMMEDRAFT_126875
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     FOMMEDRAFT_126875
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    FOMMEDRAFT_126875
  Chromatin remodeling factors
   NuRD complex
    FOMMEDRAFT_126875
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 18671446
NCBI-ProteinID: XP_007268999
JGI: Fomme1_126875
LinkDB
Position
Unknown
AA seq 558 aa
MSKRRVSYYYDNDVGLFSYGLGHPMKPHRIRMTHDLVSAYGMLDKMDILRPRRASPTNMT
AFHTDEYIHFLGRVTPETAEELTYHGTRFLVGEDNPAFEGVFEFCTISAGGSIDAAKRIA
AGATDIAINWAGGLHHAKKREASGFCYVNDIVLGILELLRTFPRVLYIDIDCHHGDGVEE
AFYTTDRVLTCSFHKFGEYFPGTGHVDDHGRDKGLGYAVNVPLRDGLTDEAFKGVFEPVI
QRILEWYQPSAVVLQCGADSLSGDKLGCFNLTMEGHASSVQYLRKSGLPLILLGGGGYTI
KNVSRAWAYETACALNIEDTIDRNLPWNAYFEWFGPRYRLEVAENNMDDLNPKDGYLESI
KEQVFKQMSALPFAPSVQMHEVPGESLGEHLGIPPFDIEENQESEELDNKLGQQFRRVFN
LRRNESSSSDDDGPSSPDSDSDDIQATERSRRHLYPHRYAKRMSLLGSMKTSITDEDAGQ
TARRFFHSAAVWDPTLKTVVLRDGVGAARGDLPSMDLTGPPTSQERMQLQMNGVDEDDMA
VDADERWGNGDVSISVES
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgtcaaaacggcgtgtatcgtactattatgacaatgatgtcggccttttctcgtacggt
cttggacatccgatgaagccgcaccggatacgcatgacgcatgatctcgtctctgcatat
ggcatgctcgacaagatggacattttacgaccccgacgagcttctccaacaaatatgacc
gcgttccacacagatgaatatatccacttcttgggcagagtgacgccggagacggcagag
gagttgacatatcatgggacgcgcttcttggtaggagaggacaatcctgcatttgaaggc
gtcttcgagttttgcacgatatccgcaggcgggtcaatagatgctgcgaagcgtattgcc
gctggagcaacagacatcgcaatcaactgggctggtggactacatcacgccaaaaagcgc
gaagcttctgggttctgctacgtcaacgatatcgtacttggcatccttgagctcttgcga
acatttccgcgtgtactgtacatcgacattgactgccaccacggggacggtgttgaagaa
gcattctacacgacggatcgagtgcttacatgctcgttccacaagtttggggagtatttc
ccgggcacgggacatgttgatgaccatgggagggataagggccttggttatgctgttaac
gtcccgctaagagatggccttacggatgaagccttcaagggtgttttcgaacctgtgatt
caacgtattctcgagtggtaccaaccttctgccgttgtacttcaatgcggggcagattca
ctttcaggcgacaagctcgggtgcttcaacctcacgatggagggacacgccagcagcgtg
caatacctccgtaaatcgggacttcctcttattctactcggcggcggcggatatacgatc
aagaacgtttcgcgagcttgggcatatgagacagcgtgtgcgctcaacatagaggatacg
attgatcggaacttaccgtggaatgcatattttgagtggtttggcccaaggtatcggttg
gaggttgcagaaaacaatatggatgatttgaatccgaaggatggctacttagaaagtata
aaagaacaggtgttcaaacaaatgtcggcgttacccttcgcaccctccgtacagatgcac
gaagtcccaggggaaagtttaggcgagcatctcggaattcctcccttcgatatcgaagag
aaccaggaatcagaagaacttgacaataaactcggtcaacaattccgccgtgtattcaat
cttcgccggaacgagtcgtcatcaagtgacgacgacgggccatcatcacccgactccgac
tcagacgacatacaagcaaccgaaaggagtcgaagacacctatatccacatcgttatgca
aaacgcatgagtctacttgggtctatgaagacgtctatcacggacgaagacgcaggccag
acggctcgaaggttcttccacagtgcggctgtgtgggatcctactttgaagactgttgtg
ttgagagatggtgtaggtgctgcgcggggtgatttaccttcgatggatttgacaggtcct
ccgactagtcaggagcggatgcaacttcagatgaatggtgtggatgaagacgacatggct
gttgacgcagacgagaggtgggggaatggtgatgtttcgatcagtgtcgagtcgtga

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