Fomitiporia mediterranea: FOMMEDRAFT_126887
Help
Entry
FOMMEDRAFT_126887 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
fme
Fomitiporia mediterranea
Pathway
fme02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FOMMEDRAFT_126887
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fme02000
]
FOMMEDRAFT_126887
Transporters [BR:
fme02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
FOMMEDRAFT_126887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_CDR
ABC_trans_N
ABC2_membrane_7
RsgA_GTPase
AAA_22
AAA_16
AAA_29
AAA_21
AAA_25
SMC_N
TsaE
AAA_23
Motif
Other DBs
NCBI-GeneID:
18671447
NCBI-ProteinID:
XP_007269006
JGI:
Fomme1_126887
LinkDB
All DBs
Position
Unknown
AA seq
1542 aa
AA seq
DB search
MALAYEHDLEGPVLTTDSAGEDEVTTGSPPGLVESNVTHDGAFHRHFGMESHPSNGTHAL
AGLEGPAEHHEPTTVSHVAIDHFDPDGVNELKRTLTRQSANVGIAGPTQRACVRKQPSGI
THSSSASTVVQETGGLYSEKFNFEQHLRDVVRQENEHGIQPRELGVVFQNLRVQGRGTTA
SFQPTVGSLLNPFLAAEKMRNLLHPPVRDIISGFEGVVNPGEMLLVLGRPGSGCSTLLKA
LSNQHDEYHNVSGLLHFSSFTPKQIRKHFRGDVIYCPEDDVHFPTLTVGETIGFAARTRM
PNKATRLPGVSRREFADNVVEMLGTVFGLKHVKNTKVGNASIRGVSGGERKRVSIAEALA
TRAKLGAWDNSTRGLDSSTALEFVRALRIATDNLGLTSIVSIYQASELLYDLFDKVCVIN
EGRMVYFGPAREARQYFIDQGWEPANRQTTADFLVAVTDPGGRTAREGYELRIPRTADEM
VAAFQHHPLAERNRREIAAFLASNVLLDSSDSGHETLDLKRFSSISPVSKEDKEIKRMSY
IHSARAERAKFSLPESPYTISIASQVREVIIRRVQILRGDWFTQVLTVGSYVFEGIIIGT
LFFKLEVSTSAYFSRGGVLFFAILFGAFSSMAEIPALYAQRPIVHRHEKAAMYHPFTEAI
ALTLVDIPISLFTLLLFSLVLYFLVRLQRSASQFFIFYLLVVIVTLTMKAFFRTLAAAFK
RESGAQALAGVAMMALVLYTGYTIPKPSMIGALRWITYISPVRYGFEAILTNEFFTLNGT
CATLVPSGPGYENVSLANQVCTTVGSIQGQQTVDGNRFVQLSYGYSRSKLWMNFGIEIAF
YVGFLVFLLLFTELNTSSAADTAMTLFKRGAKALVGVEASGEPTDEEKGPARGPAAAKSE
NSWKVEITPESTPKMTDIFSWRNLQYTVPIGKGETRRLLDDVSGYVVPGKLTALMGESGA
GKTTLLNVLAGRTDTGVILGDRFVNGQGLPHDFQAQTGYCQQMDTHLPEATVREALLFSA
MLRQPRSIPLEEKEAYVDTCLKMCGLEAFADAIVGTLNVEFKKRTTIGVELAAKPKLLLF
LDEPTSGLDSQSAWAIMAFLRNLADNGQAILCTIHQPSSELFQVFDRLLLLRKGGQMVYF
GDLGDNCSTLIDYFERNGARKCGPQENPAEWMLDVIGAGATATTTIDWHEAWNNSVEAAK
FKVHLEEMHEEGRKKPPVQATQKSEFATPWGYQLYVLLMRAFQAYWRNPTYIMAKQFLNI
AAGLFLGFTFFKADDSIQGTQNKLFAIFMSTLLAVAHANTIQVAFIDFRNIYEVRERPSR
MYSWTALVTTQLLVELPWNIFGSTLFFLCWYWTVGFESSRAGYTYLMFCVVFPLYYTTLA
HAVAATAPNAVIGAVLFTALFSFVIAFNGVLQPFAQLGWWKWMYHLSPYTYLVEGLLGQA
IGKMEINCSPIELVPISPPDGQTCAQYMNAFISFAGGYLTNPNATSSCQFCAFRTTDQFM
AASFNMFYSHRWRDFGLLMTYIAFNTVMIYVFTYVFRIRSWR
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggctcttgcctacgagcacgatctggaaggccctgtactcactactgactctgcagga
gaggatgaagtcactactgggtcacctcctggtcttgtagagtcgaatgttacccacgat
ggtgcttttcatcgccattttggcatggagagccaccctagtaatggtactcatgcactc
gctgggctggaggggcctgcagagcaccatgagccaacaacagtctcgcatgttgccatc
gaccactttgatccagatggtgtgaacgagctgaagcgtaccctaacacggcaaagtgcc
aatgtgggcattgcaggtcctactcagcgtgcatgcgtgcgaaagcagcctagcggaatt
acgcattcctcatcagctagcaccgttgtgcaggagacgggtggactctactcagagaag
tttaattttgaacagcatctgagggatgtcgtacgacaagagaatgaacatggcattcaa
cctcgcgagctcggcgttgtattccagaaccttcgtgtacaaggccgcggaacgacggcg
agcttccaaccaactgttggttcgctattgaatccattcttggccgcggaaaaaatgagg
aacttacttcatccccccgtacgagatatcatatccggttttgaaggtgtggtcaatcct
ggagagatgctgctcgtgctcggccgtcctggctctggatgttcgacattgctcaaggcg
ctttcgaatcagcacgatgagtaccataacgtatcgggactgttgcacttctcttccttc
acgccgaaacaaatacgcaagcacttccgaggcgacgtaatctactgtcccgaagatgac
gttcacttcccaactctcactgtgggcgagacgattggctttgccgcgcgtacgcgcatg
cctaataaagcgactcgccttcctggtgtgagtcgacgtgagtttgccgacaacgttgtc
gaaatgctcggtacagtcttcggtctcaaacatgtcaagaacacgaaagtcgggaatgcc
tcgatacgaggtgtgagtggtggcgagcgcaagcgtgtatcgatagcagaagcccttgca
actcgcgcgaaactgggcgcgtgggacaactctacacgtgggctggattcttcaactgca
ttagagttcgttcgtgccttgcgaatcgcaacagacaatttaggcctcacgtcaatcgtt
tcaatttaccaagcgtcggagctgctgtatgatctctttgacaaggtttgtgtcatcaat
gagggacggatggtttactttggacctgcaagggaggcacgacagtatttcatagatcaa
ggatgggagcctgcgaataggcagacaactgcagatttccttgtcgctgtaaccgatccg
ggtgggaggacagcgcgtgagggatacgagttacgcatcccacgcacggctgacgagatg
gtcgctgctttccagcaccatccacttgcagagcgaaatcggcgggagatcgcggcattc
ctagcctcaaatgtccttcttgactccagtgactcaggacatgaaaccctcgacttgaaa
aggttttcaagcatttcgccagtgtcgaaggaagataaagagattaaacgcatgtcatac
atacattccgcccgagccgaacgagccaagttttcgttacctgagagtccatacactatc
agcattgcgagtcaagtgcgcgaggtgattatacgaagagtgcaaatcctccgtggcgac
tggttcacgcaggttctcacagttggatcgtatgtgttcgaaggaataatcattggcaca
cttttcttcaagctcgaagtctcgacgagtgcatatttctcgcgtggtggtgtgcttttc
ttcgccatcctcttcggtgcattttcaagtatggcagagattcctgcgttgtatgcacaa
cgacccatcgttcatcgacacgagaaggccgcgatgtatcacccgttcacagaagcgatc
gcattgactctcgtcgatataccgatctctttgttcacactcctccttttctcgcttgtc
ctttactttcttgtcaggctccaacggtctgcgagtcaattctttattttttaccttctg
gttgtcattgttacgttgacaatgaaggcattcttccgtacgctcgctgcggcatttaag
agggagtcaggcgctcaggctcttgctggcgtcgctatgatggctcttgttctctatacc
ggttatacaattccgaaaccgtcgatgattggtgctctgaggtggatcacttacattagt
ccggtccgctatggcttcgaagcaattttgacgaacgaatttttcacactaaatgggacg
tgtgctacgcttgtgccgagtggtcctggatacgagaatgtctcacttgccaatcaggtg
tgcacaactgttggatctatccagggtcaacagactgtcgatggcaatcgcttcgtacaa
ctttcgtacggttattcgcgttcgaagctctggatgaacttcggaattgaaatcgcgttc
tatgtgggcttcctcgtattcctcctactcttcactgagctcaatacctcgagcgctgcg
gataccgctatgactttgtttaagcgtggggcgaaagcattggtcggagtcgaggccagc
ggcgagccgacagatgaggaaaaaggccccgctcgtggccccgcagcggcaaagagtgaa
aactcgtggaaggtcgaaattacaccggagtcgacgccaaagatgacggatatcttctcg
tggcgaaatttgcaatatactgttcctataggcaagggtgagacgcggcgtctgctggat
gacgtctcgggttatgttgtccctggaaaattgactgcacttatgggtgaatctggagca
ggcaagacaacccttctgaatgttctcgctggacgcacagatacgggtgtaatattgggc
gatcgtttcgtcaacggccaaggtctaccgcatgacttccaagcacaaaccggctattgt
caacaaatggatacgcatctgccagaggcgaccgttcgcgaggcactcttattttctgca
atgctgagacaaccgcgttcaattcctcttgaggaaaaggaagcatatgtcgatacttgc
ttaaagatgtgcgggttagaggcttttgctgatgccattgttggtacgttgaacgtcgag
ttcaagaagcggacaacgatcggagtagaacttgccgcgaagccgaagcttttgctcttc
ttggacgagccaaccagtggtctggatagtcagtcagcctgggcgatcatggcgtttttg
cgcaatctggcagacaacggacaggcgattctttgcaccatccatcagccttcgagcgaa
ttgttccaagtcttcgaccgcttattgcttcttcgcaaagggggacaaatggtgtacttt
ggggatctcggggacaactgctcaacgttgatcgactattttgagagaaacggtgcacgc
aagtgtggaccgcaggagaatccagccgaatggatgctcgatgtaattggagctggcgcg
acggcaactactacgatagactggcatgaagcttggaacaattcggtagaagctgccaaa
ttcaaagttcacctggaggaaatgcatgaagaaggccgaaagaaaccaccagtccaagca
acacagaaatcggagttcgccacaccttggggttatcaactttacgtactcttaatgcgt
gccttccaagcttactggcgcaacccaacttatatcatggcaaagcagttcttgaacatc
gctgctggtcttttccttgggtttacattcttcaaggctgatgattcgatccaaggcacc
cagaacaagcttttcgcaatcttcatgtcgactctccttgctgtggcacatgctaacaca
atccaagtggccttcattgattttcggaacatatatgaagtgcgcgagcgcccaagtaga
atgtacagctggacggcactcgtgacaactcagcttctggttgagttaccatggaatata
ttcggctctactttgttcttcctttgctggtactggacggttggatttgagtcgagtcga
gcagggtatacgtacttaatgttttgcgtcgtctttccactctattatacgacacttgca
cacgccgttgcagcaacagcaccaaatgctgtaattggcgccgtgcttttcacggctctg
ttctctttcgtaatagcattcaatggcgtattacaaccctttgctcaattaggttggtgg
aagtggatgtaccacctttctccgtatacgtaccttgtcgaaggacttcttgggcaagcg
attgggaaaatggagataaattgctcccctatcgagcttgtaccgataagcccacccgac
ggtcagacttgcgcgcaatatatgaatgcctttatttccttcgctggtggatacttgacc
aaccctaatgcaacgagtagttgtcagttctgtgctttccgtacaacggatcagtttatg
gcggcctcattcaacatgttctattcgcaccgttggcgcgactttgggttactgatgact
tacatcgcctttaataccgtcatgatttatgtgtttacatacgtcttccgtattcgctcg
tggcgctag
DBGET
integrated database retrieval system