Fomitiporia mediterranea: FOMMEDRAFT_128427
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Entry
FOMMEDRAFT_128427 CDS
T03132
Name
(RefSeq) WD40 repeat-like protein
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
fme04990
]
FOMMEDRAFT_128427
Domain-containing proteins not elsewhere classified [BR:
fme04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
FOMMEDRAFT_128427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_HPS5
eIF2A
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Ge1_WD40
Beta-prop_TEP1_C
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Beta-prop_WDR19_2nd
RAB3GAP2_N
WD40_RFWD3
PROPPIN
PQQ_3
Beta-prop_SCAP
DUF228
Motif
Other DBs
NCBI-GeneID:
18671522
NCBI-ProteinID:
XP_007270609
JGI:
Fomme1_128427
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MAPPLFTLTSLFPANPNTDRGASTKLHISKDNKLIYANGRTVIIRDLKNPSAAKAYSGHS
RNVTVARFSPSGYYCASADTAGTVRVWDTLGEENILKREVPAISGKVNDLAWDGDSQRII
AVGDGRETFGKAFMVETGSSTGEIAGHTKVINAVSIRHQRPFRAVTASDDCTIVFHTGVP
FKYEKTIKTHTKFVQDVRYSANGDHFASVGSDSKVFLYEGKTGEPLGECSGEVHKGSIMA
ASWSPDSKNLATSSLDGTVKLWDVERKLTVQTWTVGTGVQNQQVGNAWGPEGDIVSLSMS
GIVNVFDQRKGDGPAHLLIGPQKTITAATLTASGTFIAGTADGRLLSYDIANGDAQVVSG
TGHLSLVTSIVSAGENTYSVGIDNALKEISPDAKSMTEASTNLQSQAKALALSDEGTTFV
SEADKIEGFRSNQRVAQLPVKYQANGIASTGKLVAVGGGDNKIHLYSWNGKELKEDGVLE
TPRGPALTLAFSPDGKLLVSGDATGKIILFDVTEKKAIESRWTNHASRVNSLVWAPTGTH
IASGSLDTHVFVWSVANPLTNVPIRHAGPGGVNAVAWLEASKDKGKLATAGADGCVRIWE
VILQA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcaccccctctattcactctcacgtccttgtttcctgccaacccgaataccgatcga
ggcgcatcaacaaagcttcacatcagcaaggataataagctaatatatgctaatgggaga
accgtgattattcgtgatcttaagaatccatcggctgcaaaagcgtattccggtcactct
cggaatgttactgtcgcaagattctctccctctgggtattactgcgcctctgcagatacg
gctggtacagttagagtatgggacacactaggggaagaaaatatcctaaaacgtgaagta
cccgctattagtggaaaggtgaatgatctggcttgggatggagacagccaacgcattatt
gctgttggagatggcagggaaacctttggtaaagctttcatggtcgagacgggatcttct
actggagagatcgctggacatacgaaggtgatcaacgccgtatccatccgacatcaacga
ccgttccgcgcagttactgcatccgatgattgtactattgtctttcatacaggcgtccca
ttcaagtacgaaaaaaccataaagacacatacaaaattcgtacaggacgtcagatactcg
gcaaatggagaccactttgctagcgttggttccgatagtaaagttttcttgtatgagggg
aagactggagaaccgcttggggagtgtagtggagaagtgcataagggtagcattatggca
gcgagttggagtcctgatagcaagaatcttgctacgtcttccttggatggaaccgtcaaa
ttgtgggatgtcgagagaaagttaacggttcaaacatggacagtcggtacaggcgtgcaa
aatcagcaagtcgggaatgcatggggtcctgaaggggacatagtatcactctccatgtca
ggcattgtcaacgtctttgaccagcgaaagggcgatggacctgcccatttgctcatcggc
ccacaaaaaaccattacagctgcgacgctcacagcgtccggaacatttattgccggcacg
gcggatggtagactcctttcatacgatattgcaaacggtgatgctcaagttgtatccggt
actggtcacttgagtctcgtgaccagcattgttagcgctggagagaacacgtacagtgtc
ggaatcgacaatgcactgaaggaaatcagcccagatgcgaagagcatgaccgaagcttca
acgaatttgcaatcacaagcaaaagctctggcgttatcggatgaagggacgacgtttgtc
tccgaagcggataaaattgaaggattccggtccaaccagcgtgttgcacagcttcccgtg
aaataccaggcgaatggtattgcaagcaccggaaaactcgttgcggtcggaggaggggac
aacaaaatccatctctattcatggaacgggaaagagttgaaagaagacggtgtcctcgag
actccgcgcggacctgctctcacattggcgttctcgcccgatgggaagcttctagtgtcc
ggagacgcaactggaaagatcattttgtttgacgtcacagaaaagaaggccatcgaatct
cgatggacaaatcacgcttcgcgcgtcaactcgctcgtttgggcacctacggggacgcac
attgcctcaggctcgctcgacacgcacgttttcgtctggtctgttgccaatccgttgacg
aacgtgccgattcggcacgcaggacctggtggcgtcaatgccgtggcatggcttgaagct
tccaaggataagggcaaattagctaccgcgggtgccgatggctgcgtgcgcatatgggag
gtgatactgcaggcatga
DBGET
integrated database retrieval system