KEGG   Fomitiporia mediterranea: FOMMEDRAFT_128955
Entry
FOMMEDRAFT_128955 CDS       T03132                                 
Name
(RefSeq) hypothetical protein
  KO
K08775  breast cancer 2 susceptibility protein
Organism
fme  Fomitiporia mediterranea
Pathway
fme03440  Homologous recombination
fme03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    FOMMEDRAFT_128955
   03460 Fanconi anemia pathway
    FOMMEDRAFT_128955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fme04121]
    FOMMEDRAFT_128955
   03036 Chromosome and associated proteins [BR:fme03036]
    FOMMEDRAFT_128955
   03400 DNA repair and recombination proteins [BR:fme03400]
    FOMMEDRAFT_128955
Ubiquitin system [BR:fme04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    FOMMEDRAFT_128955
Chromosome and associated proteins [BR:fme03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     FOMMEDRAFT_128955
DNA repair and recombination proteins [BR:fme03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     FOMMEDRAFT_128955
   FA (Fanconi anemia) pathway
    Downstream FA components
     FOMMEDRAFT_128955
SSDB
Motif
Pfam: BRCA-2_OB1 BRCA-2_helical
Other DBs
NCBI-GeneID: 18671544
NCBI-ProteinID: XP_007271088
JGI: Fomme1_128955
LinkDB
Position
Unknown
AA seq 619 aa
MQKARPHSVASTPITDTDSPGPRSRIESNRSLQYTTPIRTPVQQRVGTSTRPLKPAFSTP
FKQGMRPGEPGRESLGRAQKVRGEIGTSRKLPPGRIKATGKVPLRESGLIPQQYTPEELE
DMGVNIAELKQITPQTAPFYVFHTSASYIPSTQSQAASGSSGLSLGPKEAQDHLRKAGRN
ATQEWVENQWALVLWKLAGLATLDPTREATPSRRWCWRSVLEQLEARYDKELEKGARPAL
RLITTGDAPAGSPLVLVITAILSSERERLGPNGRVVQDASAEIEVSDGWYRLRASVDAPL
ARAVIRGIIRPGRKIAVAGAKLDNLKKDPCEILEAYNSCILTLSGNGSHLAPWHGKLGFQ
TEPFVATLGSLTPDGGPVPLVDIIVEKVHPIAFLEFLPGDRPGEKIREGPRGEAEEAATE
DAWRKRRDAAESKVRDELSVRWSRWEGFADRLERSAGSKFNPCPDDMPPDHIEDLLDELD
ALDPAEVGDFVRQLAADECGWLARYLRQRLERDRERALEEIEVEVKHTCPPREVRNFRIV
QVRDARTARRPANRIAHLCIWDVLSLCVAEGGKAGAIESGQRFLMTSLVPMQRSCWMGRA
KDDMVYLSTTRNTRFYRLK
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgcagaaggcacgaccgcactcagtggcttctaccccgatcacagacacagatagtcct
ggccctcgctctcggattgaatcgaatcgttccttacaatacacgacacctattcgaaca
ccagtgcagcaacgagtcgggacctcaacccgcccgctcaaacccgctttctcaacgcct
ttcaagcaaggcatgagaccgggcgaacctggaagggaatcactgggccgcgctcagaag
gttcgaggagagattgggacgtctcggaaattgccgccgggaagaattaaagctacaggg
aaagttccactacgagagtccggtctcattcctcagcaatatactcctgaagagctagaa
gacatgggagtgaacattgctgagctcaagcaaataacaccgcagacagcacctttctat
gtttttcatacgtcagcaagttacataccatctacacaatcacaagctgcctctggttcg
tccggcctttcacttgggcctaaggaggcacaggatcatctccggaaagcaggccgtaat
gctacgcaagaatgggtggaaaatcagtgggcacttgtcctctggaagcttgcgggactt
gcaacgctcgacccgacacgagaagcgactccatctcgtcgctggtgctggcgatcggta
cttgaacagctcgaggcacgctatgacaaagaactcgagaaaggcgcacgcccagcgctc
cgactgattacgactggtgatgcgcctgcagggtctccgctagtacttgttatcacagcc
attctatcgtcagagagagaacggctagggccgaatggacgagtagtacaggatgcgagt
gctgagattgaggtgagcgatggctggtatcgccttcgagcctcagtcgatgcaccactt
gcacgggcggtcatacgaggcataattaggccgggcaggaaaattgctgtagcaggggcg
aagcttgacaatctcaaaaaagatccttgcgaaatcctggaagcatacaattcatgtata
cttaccctttccggcaatgggtcgcacttagctccatggcacgggaagctaggctttcag
acagagcccttcgttgcaactctgggcagtctaacacctgatggcggacctgtgccttta
gttgacatcattgttgaaaaggtgcatccaatcgcgtttctcgaatttctgccaggtgac
agaccaggcgagaaaattcgtgaaggtcctcgcggtgaggcagaagaggccgcaactgag
gatgcatggaggaaacggcgagatgccgcggagtcgaaagtacgggacgaacttagcgta
cgatggagtcgatgggaaggctttgcagaccgattggaacgctcggcaggctcaaagttc
aatccttgtcccgacgatatgcccccggatcacattgaagacctcctcgacgagctcgat
gctcttgacccagcggaggtcggtgattttgtccgtcaactagctgcagatgagtgcggc
tggcttgcgcgttacctccgacagcgtttagagcgagatcgcgaacgcgcgcttgaggaa
atagaagttgaagtcaagcacacttgtccaccacgcgaagtgcgcaacttccgaatagta
caggtccgggatgcacgtacagctcgacgtcctgcgaatcgtattgctcatctatgcatt
tgggacgtgctctcattgtgcgtagctgaaggaggaaaagcaggtgctattgagtctgga
caacgtttcctcatgacgagcctggtacccatgcaacgtagctgctggatgggacgcgca
aaggacgatatggtatacctctccacgacgagaaacacgcgtttttaccggctcaagtag

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