Fomitiporia mediterranea: FOMMEDRAFT_128955
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Entry
FOMMEDRAFT_128955 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
fme
Fomitiporia mediterranea
Pathway
fme03440
Homologous recombination
fme03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FOMMEDRAFT_128955
03460 Fanconi anemia pathway
FOMMEDRAFT_128955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fme04121
]
FOMMEDRAFT_128955
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_128955
03400 DNA repair and recombination proteins [BR:
fme03400
]
FOMMEDRAFT_128955
Ubiquitin system [BR:
fme04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
FOMMEDRAFT_128955
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
FOMMEDRAFT_128955
DNA repair and recombination proteins [BR:
fme03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
FOMMEDRAFT_128955
FA (Fanconi anemia) pathway
Downstream FA components
FOMMEDRAFT_128955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
18671544
NCBI-ProteinID:
XP_007271088
JGI:
Fomme1_128955
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MQKARPHSVASTPITDTDSPGPRSRIESNRSLQYTTPIRTPVQQRVGTSTRPLKPAFSTP
FKQGMRPGEPGRESLGRAQKVRGEIGTSRKLPPGRIKATGKVPLRESGLIPQQYTPEELE
DMGVNIAELKQITPQTAPFYVFHTSASYIPSTQSQAASGSSGLSLGPKEAQDHLRKAGRN
ATQEWVENQWALVLWKLAGLATLDPTREATPSRRWCWRSVLEQLEARYDKELEKGARPAL
RLITTGDAPAGSPLVLVITAILSSERERLGPNGRVVQDASAEIEVSDGWYRLRASVDAPL
ARAVIRGIIRPGRKIAVAGAKLDNLKKDPCEILEAYNSCILTLSGNGSHLAPWHGKLGFQ
TEPFVATLGSLTPDGGPVPLVDIIVEKVHPIAFLEFLPGDRPGEKIREGPRGEAEEAATE
DAWRKRRDAAESKVRDELSVRWSRWEGFADRLERSAGSKFNPCPDDMPPDHIEDLLDELD
ALDPAEVGDFVRQLAADECGWLARYLRQRLERDRERALEEIEVEVKHTCPPREVRNFRIV
QVRDARTARRPANRIAHLCIWDVLSLCVAEGGKAGAIESGQRFLMTSLVPMQRSCWMGRA
KDDMVYLSTTRNTRFYRLK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggcacgaccgcactcagtggcttctaccccgatcacagacacagatagtcct
ggccctcgctctcggattgaatcgaatcgttccttacaatacacgacacctattcgaaca
ccagtgcagcaacgagtcgggacctcaacccgcccgctcaaacccgctttctcaacgcct
ttcaagcaaggcatgagaccgggcgaacctggaagggaatcactgggccgcgctcagaag
gttcgaggagagattgggacgtctcggaaattgccgccgggaagaattaaagctacaggg
aaagttccactacgagagtccggtctcattcctcagcaatatactcctgaagagctagaa
gacatgggagtgaacattgctgagctcaagcaaataacaccgcagacagcacctttctat
gtttttcatacgtcagcaagttacataccatctacacaatcacaagctgcctctggttcg
tccggcctttcacttgggcctaaggaggcacaggatcatctccggaaagcaggccgtaat
gctacgcaagaatgggtggaaaatcagtgggcacttgtcctctggaagcttgcgggactt
gcaacgctcgacccgacacgagaagcgactccatctcgtcgctggtgctggcgatcggta
cttgaacagctcgaggcacgctatgacaaagaactcgagaaaggcgcacgcccagcgctc
cgactgattacgactggtgatgcgcctgcagggtctccgctagtacttgttatcacagcc
attctatcgtcagagagagaacggctagggccgaatggacgagtagtacaggatgcgagt
gctgagattgaggtgagcgatggctggtatcgccttcgagcctcagtcgatgcaccactt
gcacgggcggtcatacgaggcataattaggccgggcaggaaaattgctgtagcaggggcg
aagcttgacaatctcaaaaaagatccttgcgaaatcctggaagcatacaattcatgtata
cttaccctttccggcaatgggtcgcacttagctccatggcacgggaagctaggctttcag
acagagcccttcgttgcaactctgggcagtctaacacctgatggcggacctgtgccttta
gttgacatcattgttgaaaaggtgcatccaatcgcgtttctcgaatttctgccaggtgac
agaccaggcgagaaaattcgtgaaggtcctcgcggtgaggcagaagaggccgcaactgag
gatgcatggaggaaacggcgagatgccgcggagtcgaaagtacgggacgaacttagcgta
cgatggagtcgatgggaaggctttgcagaccgattggaacgctcggcaggctcaaagttc
aatccttgtcccgacgatatgcccccggatcacattgaagacctcctcgacgagctcgat
gctcttgacccagcggaggtcggtgattttgtccgtcaactagctgcagatgagtgcggc
tggcttgcgcgttacctccgacagcgtttagagcgagatcgcgaacgcgcgcttgaggaa
atagaagttgaagtcaagcacacttgtccaccacgcgaagtgcgcaacttccgaatagta
caggtccgggatgcacgtacagctcgacgtcctgcgaatcgtattgctcatctatgcatt
tgggacgtgctctcattgtgcgtagctgaaggaggaaaagcaggtgctattgagtctgga
caacgtttcctcatgacgagcctggtacccatgcaacgtagctgctggatgggacgcgca
aaggacgatatggtatacctctccacgacgagaaacacgcgtttttaccggctcaagtag
DBGET
integrated database retrieval system