Fomitiporia mediterranea: FOMMEDRAFT_129355
Help
Entry
FOMMEDRAFT_129355 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K12822
RNA-binding protein 25
Organism
fme
Fomitiporia mediterranea
Pathway
fme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOMMEDRAFT_129355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_129355
Spliceosome [BR:
fme03041
]
Complex A
U1 snRNP components
U1 related factors
FOMMEDRAFT_129355
Complex B
FOMMEDRAFT_129355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PWI
Motif
Other DBs
NCBI-GeneID:
18671568
NCBI-ProteinID:
XP_007271351
JGI:
Fomme1_129355
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MQGYPGMNMNRPGLGLRPPMPSYGQGPSMMTLAQRQQAPPARPAQEGITLFVGSIAGGIT
DSFLQQLLGTCGTLVSFKRLITPANKPQGFGFATFDSPESAARAIKLLDGVELPGMEDGA
PNKKLLVRADELNKGMIDAYFASRMNTDTDDAQVQHARIQITELLQNIKKQHDEAADKGS
FDKERYVIPPHLHDLQEADLPETQRGLVISEIAQFRERAAKREREKMVEVTSAAVPALAP
AGPKQREWGKPQGSAHSPTRQQGYGNGAQGYNKPVGFVRESGRDAGSSSNNTQKTDEEME
EERKEARRRNEENSFRDRERRYEPRERRRITEMERSIARQRATREAEEHDKVEMKSRLHV
WDDDESDELFYTDRARWRAQRVRRLRAEEAADEQSRSYEEKEAENLRRESEAFLARQMDE
MQQLADEQRKAGMLLDDGAPVKLNVSLQAANAQKAESADPKAAVAAAAFAAQEEEEEEFK
KRKVPLVKLDFSVAEGEKAKERLEKIRENVPRDKDALFKAKVRWDGLSDQLIDRKLEPLI
KRQMTKYLGELEDDDLVMFTVEHLKDHKGPQKLVEGLEPVLEEESVEFVTSIWRQIIFES
MAYGEGLHTERMMVD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggatatccaggcatgaacatgaatcggcctggtcttggtctacgtccgcccatg
ccttcgtacggccaaggaccttccatgatgactcttgctcaaaggcagcaggcacctccc
gcacgcccggcgcaggaaggtattacgctctttgtcggctcgattgccggtggtataacc
gattcattcttgcagcagttgctcggcacatgtggaacgctagtttctttcaagcgcctc
atcacacctgccaataagcctcaaggtttcggctttgcgacgttcgacagcccagaatct
gcggcgcgtgccatcaagctacttgatggtgtcgagctgcctgggatggaggatggtgct
ccgaacaaaaagcttttggtgagagccgatgagcttaacaaagggatgattgacgcctat
ttcgcctcgcgtatgaacactgatacagatgacgctcaggtacaacacgcgcgaatacaa
ataaccgaactactacaaaacatcaaaaagcagcatgacgaagctgcagataagggttcc
ttcgataaagaaagatacgtgattccgcctcatctgcatgacctccaagaagcagacttg
ccggagacccagcgtggactagtcatttccgaaatagctcagttccgtgaacgtgcggcg
aagcgcgagcgtgaaaagatggtcgaggtcacatcggcggccgtcccagctcttgcgccg
gcaggtccaaaacagcgtgagtggggaaaacctcaagggtctgctcattccccaactagg
cagcaaggatacggcaatggagcacaagggtataacaaacctgtgggatttgtcagggaa
agtggcagagatgctggaagctcgtcaaataatacccaaaagacggacgaagagatggaa
gaagagcggaaggaggcaagaaggcgaaatgaggagaattcgtttagagaccgtgaacga
agatatgaacctcgggaacggaggcgaatcactgagatggagcgctctattgcgaggcaa
cgagcgacgagggaggcggaagaacatgacaaagttgaaatgaagtctcgattgcacgtt
tgggacgacgatgaaagtgacgaactcttctacaccgatcgtgcacgatggagagcccaa
cgggtacgtcgtctgagggcggaagaagccgctgacgagcaatctcgcagttatgaagag
aaagaagcagagaacctgcgtcgtgaatctgaggcgttcttagcacggcagatggatgag
atgcagcaactcgcggatgaacagcgcaaagcagggatgctccttgatgatggtgctcct
gtcaaactcaacgtttcattgcaagcagcgaatgcacaaaaggcggagtcggctgacccg
aaagcagccgttgcagcggctgcatttgctgcgcaagaggaggaagaagaagagttcaag
aaacgtaaggtgccattggtgaaactcgacttcagtgttgcggaaggagaaaaggcgaag
gagcggttggagaagatacgtgagaatgtacctagagacaaggacgcattgttcaaagcg
aaagtccgatgggatggcctgtctgatcaattaattgatcgcaagcttgaaccgttgatc
aagcgccagatgacgaagtatctgggtgaactagaggacgatgacctggtcatgttcacc
gtcgaacacctcaaagatcataaggggccgcaaaaactcgtagaaggacttgaacctgtc
ctcgaggaagaatcagtagaatttgtcacctcgatctggcgtcaaattatcttcgaaagc
atggcgtatggcgagggactccatacagagcgaatgatggtagactaa
DBGET
integrated database retrieval system
