Fomitiporia mediterranea: FOMMEDRAFT_129976
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Entry
FOMMEDRAFT_129976 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fme04121
]
FOMMEDRAFT_129976
03400 DNA repair and recombination proteins [BR:
fme03400
]
FOMMEDRAFT_129976
Ubiquitin system [BR:
fme04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
FOMMEDRAFT_129976
DNA repair and recombination proteins [BR:
fme03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
FOMMEDRAFT_129976
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Nse
zf-RING_UBOX
zf-C3HC4_2
Vps23_core
zf-C3HC4
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
18671588
NCBI-ProteinID:
XP_007271839
JGI:
Fomme1_129976
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MRSATLPLVESVAVAMAEAGENKDGEEALKELEDTETLMRELLDLQAELLAHEDTLNTLS
NSIARGEAIDNIQQRYTDGVDNAKESWQNRTTRQKYARDEDYIRFKSSIFEVQHPDQGMP
PLTDFIPSEEGDESDDDDVAVGGVSQVYTCPLSLRVLENPMSSKICKHSFSKDSIVEYYS
SNRSLKKKCPAAGCSELQGLSDFVPNLDLERKVKAHVRREQRRQAEADSEEEQVEE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagatctgctacccttcctctcgtcgaatcagttgctgtagctatggcagaagcaggc
gaaaacaaagatggagaagaggctcttaaagaactagaagacaccgagacgctcatgcga
gagctcctcgacctgcaggcggagcttttagcccacgaagatacgctgaatacactctcg
aacagcattgctcgcggcgaggcaattgataatatacagcaacggtacacagatggtgtt
gataacgcaaaggagtcatggcagaacagaacgacaagacagaaatatgcgagagacgaa
gattacatcagattcaagtcaagtatcttcgaggttcaacatcccgatcagggcatgccc
cctttgaccgacttcattccaagcgaggagggtgatgagtctgacgatgatgacgtcgcc
gtcggtggtgtctcgcaagtgtatacctgcccactaagtctaagggtcttggaaaaccct
atgtcctcgaaaatatgcaagcatagtttctccaaggattcaattgtggaatactacagt
tcaaaccggtcgttaaagaagaaatgccctgcagctggttgtagcgagctgcaagggttg
tctgattttgtgcctaatcttgaccttgagcggaaggtcaaggcacacgtccgaagagaa
cagcgacgacaagcggaggcagatagcgaggaagagcaagtggaggaa
DBGET
integrated database retrieval system
