Fomitiporia mediterranea: FOMMEDRAFT_130391
Help
Entry
FOMMEDRAFT_130391 CDS
T03132
Name
(RefSeq) copii coat protein
KO
K14006
protein transport protein SEC23
Organism
fme
Fomitiporia mediterranea
Pathway
fme04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FOMMEDRAFT_130391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_130391
Membrane trafficking [BR:
fme04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
FOMMEDRAFT_130391
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
18671608
NCBI-ProteinID:
XP_007272113
JGI:
Fomme1_130391
UniProt:
R7SG60
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MQSFEDVEDQDGVRLSWNFWPSSRIEATRTVVPISALYSPLKQREDLPPVLYEPVACKPP
CRAILNPFCQIDIRGKLWICPFCLQRNAFPPHYKDISNTNLPPELLSKYTTIEYTLARPA
VVPPIFLFVVDTCLDEEDLKALRGALAAAIGMLPPNSLVGLITFGTMTQVHELGYAPCTK
SYVFRGAKEYSPKQIQDMLGLNPQNRAAPRPGQPIPQNFGAARFLLPVERCEWQLTNIIE
QLSRDPWPVANDKRPLRATGNAISVAVGLLETTFPNTGARITVFAGGPCTEGPGLVVSNE
LREPIRSHHDIDRDGAKHFKRATKFYEGLARRASTNGHAIDLFAGCLDQVGLLEMRSLSN
STNGVMVLSDSFATTIFKEAFFRMFDKDDQGHLLMGFNATFDVQTTKELKVSGLIGHAIS
AGKKSACVGETEIGIGQTSAWKICSLTPRTSKAVYFEVVTPAGQSLPSNSRGLIQFVTHY
QHSSGQQRLRVTTVARNFAEAGSPSIAASFDQEAAAVLMARIAVFKAEIDDSPDVLRWLD
RMLIRLCQKFADYRKEDPTSFRLADNFSIYPQFMFHLRRSQFLQVFNNSPDETAFYRHVL
NEADVNNSLIMIQPTLMSYTLDVPPQPVLLDSVSIKPDVILLLDTFFHILIFHGETVAQW
RKAGYQDQEGYENFAELLAAPSEDAKELLVDRFPIPRYIVCDQGGSQARFLLSKLNPSTT
HMSGGMYGASGGAGQAIFTDDVSLQVFMEHLKRLAVGAQTN
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcttcgaggacgttgaagaccaagatggcgtgcgtctatcgtggaacttttgg
ccgtcttcacggatagaagcaacgaggaccgttgtcccgatttccgcactttactcgccg
ttgaagcagagggaggatcttccaccagtactctatgaaccagttgcatgcaaaccaccg
tgtcgggctatcttaaatccattttgtcaaattgacatacgtggaaagctttggatctgc
cccttctgcttgcagcgcaatgcattcccgcctcattataaggatatttccaacaccaat
ctccctcccgaactactgtccaagtacacgacgatagaatacacgcttgctcgtccagca
gtggttccgccaattttcttatttgttgttgacacttgcctggacgaggaagatttaaag
gcgctccgaggtgctctggcagctgcaatcggtatgcttcctcccaactcccttgttggt
cttatcacgtttggcaccatgacgcaagtacatgaacttggctatgcaccatgcacgaag
tcatatgtcttccgtggtgcaaaggaatactcccccaagcaaatccaggatatgctaggc
ctgaaccctcagaaccgtgcggctcctcgtcccggacaaccaattcctcagaatttcggc
gctgcgcggtttttattaccggtcgagcggtgcgaatggcaactgacaaatatcattgag
caactttctcgtgacccttggccggtggcaaatgataaacgaccccttcgtgcgactgga
aatgcgatcagtgttgccgttggacttttggagacgacgttcccgaacacgggtgctcga
attacggtattcgctggagggccttgcacggagggacctggtttggtcgttagcaacgaa
ctccgagaaccaattcgctctcatcacgatattgatagagacggtgcgaagcacttcaag
cgggcaaccaaattttacgaaggtcttgcccgcagagcatcgacaaatgggcacgcaata
gatctcttcgccggatgcttagaccaagtcggtttactggaaatgagatctctatcgaac
tcaacaaacggtgtaatggttttgtcagactcgttcgcgacgacaattttcaaggaagca
ttcttccgtatgttcgacaaagatgaccaaggtcacctcctgatgggtttcaacgcgacc
tttgacgttcagacgacgaaagaactgaaggtatcaggccttattggccacgcgatttcc
gcaggaaagaagtcggcttgtgtcggcgagacggagattggtattggtcagacatcagcg
tggaaaatttgcagtcttaccccgcgtacgtcgaaagcggtctactttgaagtcgtcact
cctgctggtcagagtcttccatcgaattcccgcggactcatccagttcgtcacccactat
cagcactcctctggtcaacaacgtctccgcgtgactactgtagcgcggaacttcgccgag
gctggctctccgagcattgcagcgtctttcgatcaggaagctgcagctgtacttatggcc
cgtatcgccgtgttcaaagcggagatcgacgattcaccagatgtcttacgctggttggac
cgcatgctcatccgattatgtcaaaagttcgcagattataggaaagaagacccaacgagt
ttcagactcgcagacaacttcagcatatatccgcaattcatgttccatctccgacgaagc
cagttcttgcaggtcttcaataatagtccagacgaaactgcgttctatcgtcatgtgctg
aacgaggcggatgtgaataattcgttgattatgatccagccgacgttgatgtcgtatacg
ctcgacgtacctcctcaaccggtgcttcttgatagcgtgtcgatcaaaccggacgttatc
cttctcctcgatacgttcttccacattctcatcttccacggagaaacggtcgcacagtgg
cgcaaggcaggataccaagatcaagaaggttacgagaactttgcagagttactcgctgca
ccgtctgaagacgcgaaagaactgctcgttgatcgattccctattcctcggtatattgtg
tgcgaccaaggtggtagtcaggcgcggtttttattgtcgaagttgaacccttctacgacg
catatgtcgggtggcatgtatggtgctagtggtggagcgggacaggctatcttcacggat
gatgttagtctgcaggtgttcatggagcatttgaagcgtttggctgtcggtgcacagact
aattag
DBGET
integrated database retrieval system
