Fomitiporia mediterranea: FOMMEDRAFT_130608
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Entry
FOMMEDRAFT_130608 CDS
T03132
Name
(RefSeq) SDA1-domain-containing protein
KO
K14856
protein SDA1
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_130608
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
FOMMEDRAFT_130608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
Motif
Other DBs
NCBI-GeneID:
18671618
NCBI-ProteinID:
XP_007261372
JGI:
Fomme1_130608
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MVRSHAGRGALLSSNLPQLQNLIKRDPSAYKEEFLQQWNHYKSILSIFQANPVEQSEQFR
DMITFISQVSPCYPKETANFSEELSSLLLNHYGELNVDTKKSLISNLIILRKKDVITPVD
LLKTLFPLLPRTSSPTLRSFIRKNILQEIRNANAQRNNLKLNRAVQAMLFRMVEQGSDMD
FVFDKGKKPIRTGDVSHHSGDDALWAVFMTKDLWRKGIWNDAKSVAIISLGCFHPITKVQ
SAALHFFLDEEDGEDSSEEEDEGPDVKALQHRRTINKKTRSGDKKLAKSIKTAKKKSKSK
KSDQNNANFAALQLLQDPQTFAEKLFDILSRFDKRYTLEHKILNMQVLCRAMGTHRLCVL
PFYTYLLKYLAASQLRIPTILAALASSVHSLTPPDVLTPVLRKVAHEFVHPGVGSEVVAA
GLNAIREVCARQPWAMEEDLLGDLVEYKKSKDKGVIAAARGLLHLYRQEAPSMLKRRERG
KEASMKGTVIQPVAFGQEARTGTTVIDGLDLLEDHIRKIKEADGDDSDASGDKDDDEDGW
AGWEVASDSDTSSSSDGWMDVSSDSEHDLEISDSEDEKDNKKKRNVDDDDDSEKDEKNED
EKKDEEEEDTKKDPPQSIILTPADFALLNELRSKNTSTLTSKKRKRSQPSLQSTSDPTTI
ISESDILGAQKKLKSTYAERIASIQSGREGREKFGSAKGKKRKEAPSSSTNREKKRNKPL
MMIMASKEVRGKKKASLVEKQRRMRKHNENQQKKRK
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggttcgctctcatgctggccgaggagctttgctatcctcaaatcttccccagcttcag
aacctgattaagagagacccatcggcatacaaggaggaatttctccagcaatggaaccac
tacaagagtattctgagcatcttccaggcaaaccctgtcgaacagtcagaacaattcaga
gatatgattactttcatctctcaggtctcaccatgttatccgaaagagacagccaatttt
tctgaggagttgtcaagtctgctgctgaatcactacggcgaacttaatgtggacaccaag
aagagcttgatatccaatctcatcattcttcgtaagaaagatgttattacacctgttgat
ttactcaagacgctctttccactcctccctcgaacatcttctccgactctccgatctttt
atccgtaaaaacattcttcaggaaattcgcaacgcaaacgcacaaagaaacaaccttaag
cttaatcgtgccgtccaagccatgctttttcgtatggtcgagcaaggatcagacatggac
ttcgtgtttgacaagggcaagaaacctatccgcacgggagacgtgtcgcaccattctgga
gatgacgctttgtgggcggtcttcatgacgaaggatttgtggaggaaaggaatttggaac
gacgcaaagtcggtggcaatcatctcgttaggctgtttccaccctatcacgaaagtccaa
agtgctgccttgcatttctttcttgatgaagaggatggggaagactccagcgaagaggaa
gacgagggtccggatgtcaaggctctccagcataggaggacgattaacaagaaaacaaga
agcggggacaaaaagcttgccaagagcatcaagacagcaaaaaagaaatcaaagtcaaag
aaatcagaccaaaacaacgccaacttcgccgctctgcaactcctacaagacccacaaaca
ttcgcagaaaagctcttcgacatcctttcacggttcgacaaacgctacacgctcgagcac
aaaatcctgaatatgcaagtcttgtgtcgagcgatgggaacacaccgcctttgtgtgcta
cccttctacacatatctcctcaaatacctcgccgcctcacaactccgtatccctacgatc
cttgctgcactcgcatcgtccgtccactcgctaactcctccagacgtacttacgcctgtc
ctccgaaaggttgcgcacgagttcgtacacccaggagtgggcagtgaagtcgtcgcagca
ggactaaatgcaattcgcgaagtgtgtgccaggcagccgtgggcgatggaggaagacttg
ttaggtgacttggtggagtataagaagagcaaggataagggtgtgatagctgctgcgaga
ggtttgttacatttatataggcaggaggcaccgtcgatgttgaaacggagagagcggggc
aaagaagcaagcatgaaaggtactgtaatccaacctgttgcttttggacaagaagcccgg
actggcaccacggtcattgacggtctcgatcttctcgaggatcatatccgtaagataaaa
gaagctgacggcgatgactctgacgccagtggtgataaagacgatgatgaagacggatgg
gcaggctgggaagtcgcctcagactcggatacctcatcttcttctgatggctggatggat
gtgtcgtctgactcggagcacgatcttgagatcagtgatagtgaggatgagaaggacaat
aagaagaaacgaaatgtcgacgacgacgatgacagcgagaaagacgaaaagaatgaagac
gaaaagaaggatgaagaggaggaggacacgaagaaagatcctccacaaagcattatttta
acgccagccgacttcgcccttctcaacgaactccgctcaaaaaacacctccacactcacc
tccaaaaaacgtaaacgctcccaaccttccctacaatccacctccgaccccaccacaatc
atctccgaatcagacatcctcggcgcccaaaagaaactcaaatccacatacgccgaacgc
atcgcctctatccaatccggtcgcgaaggccgcgagaaattcggttccgcaaagggcaag
aaacgcaaagaagctccgagcagcagcacgaaccgcgagaagaagaggaataaaccgttg
atgatgattatggctagtaaggaggttagggggaagaagaaggctagtttggttgagaag
cagaggaggatgaggaagcataatgagaaccagcagaagaagaggaagtag
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integrated database retrieval system
