KEGG   Fomitiporia mediterranea: FOMMEDRAFT_131433
Entry
FOMMEDRAFT_131433 CDS       T03132                                 
Name
(RefSeq) ribosome biogenesis ATPase RIX7
  KO
K14571  ribosome biogenesis ATPase
Organism
fme  Fomitiporia mediterranea
Pathway
fme03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    FOMMEDRAFT_131433
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fme03009]
    FOMMEDRAFT_131433
Ribosome biogenesis [BR:fme03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    FOMMEDRAFT_131433
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_16 AAA_22 AAA_5 TIP49 AAA_33 AAA_14 AAA_28 RNA_helicase AAA_17 Mg_chelatase AAA_2 nSTAND3 ABC_tran NPHP3_N AAA_18 IstB_IS21 Rad17 TsaE Cytidylate_kin2 NACHT AAA_3 AAA_7 Parvo_NS1 Viral_helicase1 DUF815
Other DBs
NCBI-GeneID: 18671698
NCBI-ProteinID: XP_007262771
JGI: Fomme1_131433
LinkDB
Position
Unknown
AA seq 773 aa
MEISGRSALNKSMQGLWSTQRRGKVNLNSSVVSAPASPPGTPKVGESSASTIPPKEDQNG
SAISAADNQASVELTDGQSEPRPPTSGVKRKLRPSRTANAEEASKRYKSSLSSKDYSPPS
TRLSDLGGVEACVEKMLELVAMPLCHPEVYLHTGVQPPRGVLLHGPPGCGKTLLANAIAG
ELGVPFISVSAPSIVSGMSGESEKTLRDTFEEAKKNAPCLLFIDEIDAITPKRESAQREM
ERRIVAQFLTCMDDMSWDKTDNKPVIVIGATNRPDSLDAALRRAGRFDHEISMGVPDEEA
RAQILRVFCSRLRIEGGFDFQALAKATPGYVGADLAALTGAAGVIAVKRIFQQLSDGTIV
LPEPDVLKGAEDGMAIDSGDASGMVSQTVDRATEPLKLSTFTNLPQSLQSNSIVHFLVAH
PNPLTEAQLTPLFISYVDFTQALKQVQPSSKREGFTTVPDVTWADIGALHTIREELHMAI
VQPIRRPELFKRVGISAPCGVLLWGPPGCGKTLLAKAVANESGANFISVKGPELLNKYVG
ESERAVRQVFARARASSPCVIFFDELDALVPRRDDSLSESSARMVNTLLTELDGLDERRG
VHVIGATNRPDMLDPAMCRPGRLDKLLYVDLPTADERVEITRTVSRTVPLAGGDEAKVAL
GALVRERCEGFSGADLSALVREAGVNALRRAVFKPTGDDMDATTESEDVNVSLDDFRLAL
TKLGPSVSQVQRKKYAAMRNKFAGMSLRFTKGVEADADEVPNEVETTDSSHKI
NT seq 2322 nt   +upstreamnt  +downstreamnt
atggagatatcaggtagaagtgcgctgaacaagtccatgcaagggctttggtcaactcag
cgccgaggcaaagtaaacttgaactcatctgtcgtttcggcacctgcaagtcctcctggt
acaccaaaagtcggtgaatcatctgcatcgactatcccaccaaaagaagaccaaaatggc
tcagccatttcagcagccgataaccaagcatccgtcgaactaactgatgggcaatcggaa
ccgcgtcctccaacttcgggcgtgaagcgaaagctgcgaccctctcgtactgccaatgca
gaagaagcaagcaagagatacaagtcatccttatcttctaaagactactcgcctccttct
actcgactgtcagacctaggcggagtggaggcttgtgtggagaaaatgttggagctagtt
gcaatgccgctgtgtcatcccgaagtgtatctacacacgggcgtgcagcctcctcgcggg
gtattgcttcatggtcctccgggttgcggcaaaacgctactcgcaaatgctattgcagga
gaacttggcgttccgttcattagtgtctccgcgccttcaatagtgtcaggaatgtcaggc
gaatctgagaaaacactgcgagatacgtttgaggaggcgaaaaaaaatgcgccttgcttg
ctcttcatagacgaaatagatgcgatcactccgaagcgcgaaagtgctcagcgagaaatg
gagcgccgcatagtggctcagtttctgacttgcatggatgacatgtcgtgggacaagaca
gacaataagcctgtgattgtgataggcgcaacaaaccgcccagattcactagatgccgct
cttcgccgtgcaggacgctttgatcatgagattagcatgggagttcctgatgaagaagca
cgggcacaaatacttcgtgtattctgttcgaggctacggatagaaggaggcttcgacttt
caggccttagcaaaagcaactccaggctatgttggtgctgacttggctgctctgaccggc
gcagctggtgtcattgccgtcaagcgcatctttcagcaactgtctgatggaacgattgtc
cttccagagcccgatgtattgaagggtgctgaggatggtatggcgatagacagcggtgat
gcaagcggcatggtctcgcagactgtcgaccgagcgactgaaccactcaagttgtcgaca
ttcacaaatctccctcaatctctccaatcgaattcaatagtgcacttcctagttgctcat
cccaatccgctaactgaggcgcaactcacacctctattcatctcgtacgtagacttcacg
caagctctgaagcaagtgcaaccttcatcaaaacgggaaggctttacaacagtgccggat
gtgacttgggcagacattggagcattacatacaatacgggaggaactgcatatggcaatt
gtccaaccaattcgacgaccagaactgttcaagcgcgttggcatctccgcaccatgtgga
gtgttattatggggtccgccaggatgcgggaaaactctcttagccaaagccgtagcgaat
gaatcgggagcgaatttcatcagtgtcaaaggacccgagttgcttaacaagtacgtaggc
gaaagtgaaagagccgtacgtcaagttttcgcgagagcacgcgcctcgtcgccatgtgtc
atcttctttgatgagttagatgctctcgtacctcggcgtgatgacagtctttccgagtcc
tctgcgcgaatggtcaatacacttttgaccgagcttgatgggctggacgaacggcgcggc
gtgcatgtgatcggtgccaccaacagaccagacatgctcgatccagcgatgtgccgaccc
ggaaggctcgacaaattgctgtacgttgacctaccaactgcagatgagcgggtcgaaatc
acccggaccgtttcccgcacggtaccgcttgcaggcggtgatgaggctaaggtggctctt
ggagcgcttgttcgggagcggtgcgaaggcttcagcggcgcggatttaagtgcacttgtg
cgtgaggcgggcgtgaatgctttgagacgtgcggtattcaaacctactggcgacgacatg
gatgcgaccacggagagcgaagacgttaacgtatctcttgatgacttccgccttgccctt
acaaaactcggaccaagcgtttctcaagttcagcggaagaagtatgctgccatgcggaac
aagttcgcgggtatgtcattgcgattcaccaagggtgtagaagccgatgcagatgaagtg
ccaaatgaagttgagactacagatagctctcataaaatctag

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