Fomitiporia mediterranea: FOMMEDRAFT_131487
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Entry
FOMMEDRAFT_131487 CDS
T03132
Name
(RefSeq) SWI/SNF complex protein
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
fme
Fomitiporia mediterranea
Pathway
fme03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
FOMMEDRAFT_131487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fme03021
]
FOMMEDRAFT_131487
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_131487
Transcription machinery [BR:
fme03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
FOMMEDRAFT_131487
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
FOMMEDRAFT_131487
PBAF complex
FOMMEDRAFT_131487
GBAF(ncBAF) complex
FOMMEDRAFT_131487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
18671706
NCBI-ProteinID:
XP_007262845
JGI:
Fomme1_131487
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MEAPKAVKKRKFTDKALPSSVLHSGEFTDSKFYQQLLDMERKLDWSMSRKRAEIQDALGK
QSATTRTLRIFLSHTVSDQAWQLAGNQPGEMPNFEAGQGIPSWAFKIEGRLLEPSGRSRD
KATQKHLSNFVKHLVVDLERDTNVYPDGNTVEWRRPQALPQAGPPPVDGFTVRRTGDQPT
KVRVMMYIEHYPDQFKVHPELGALLDIKEDSRVGIVTALWNYIKLNNLQDKVDRRVIRLD
NRLKALFHTENVSFQQLPELVNHYFQPPDPIVLFYHIKPNEPPPTTPQAFDIEVKVEDTS
LKSRQNQVIVNMSSETARDIAKNDEETALLAQQIQNSQLKRTFLEAFADDPADFINKWLA
SQSRDLESVLAAGPSEGLTVREEELKRSEFFRLPWVEEAVAVQEGLRLASRSHGIA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggaagccccgaaggcagtaaaaaagcgcaagttcacagacaaggcgctaccttcctca
gtcctgcactctggcgaattcacggactcgaagttctatcaacaacttctcgacatggag
aggaagctagactggagcatgtctcgcaagcgggctgagatacaggatgctctaggaaaa
cagtctgcaacaacccgaactctacgaatattcctcagccacacagtctcagatcaagca
tggcagctcgcgggaaatcagcccggagaaatgccaaactttgaagcggggcaaggcata
ccctcatgggcgttcaagatcgaaggcaggctactggaaccgtcgggtcgttcaagagac
aaagctacgcagaaacacctctctaactttgtcaaacacctcgtcgtcgacctggaacgt
gacacaaatgtatatcctgatggcaacactgtcgagtggcgacgtccacaagccctccct
caagcaggtccaccacccgtagacggcttcacagtccgccgaacaggcgaccaaccaaca
aaagtccgcgtaatgatgtacatcgaacactaccccgatcaattcaaagtccacccagag
ctaggcgcactcctcgacataaaagaagacagccgagtcggaatcgtcaccgcactatgg
aactacatcaagctcaacaacctgcaagataaggtggaccgacgggtaattaggttggat
aataggctgaaggcgctcttccacacggaaaatgtatcattccaacaactccctgaactc
gtaaaccactacttccaacccccagacccaatcgtcctcttctatcacatcaaaccaaac
gaaccacccccgaccacacctcaagcattcgacatcgaagtcaaagtcgaagatacatct
ctaaaaagtcgccagaaccaagtaatagtcaacatgagcagcgagaccgcgcgggacatc
gccaagaatgacgaagaaaccgcactcctcgcccaacaaattcagaattcacaactcaag
cgcacattccttgaagctttcgcagatgatcccgccgactttatcaacaaatggcttgca
tcccagtcacgcgatttagaatcggtgctcgccgctggacctagcgagggtcttactgta
cgcgaggaggaacttaagcgcagcgagttcttcaggcttccttgggttgaagaggctgta
gctgtccaggagggactacggttagctagtcgaagtcatggaattgcgtag
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