Fomitiporia mediterranea: FOMMEDRAFT_133827
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Entry
FOMMEDRAFT_133827 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
fme
Fomitiporia mediterranea
Pathway
fme04136
Autophagy - other
fme04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
FOMMEDRAFT_133827
04136 Autophagy - other
FOMMEDRAFT_133827
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fme01002
]
FOMMEDRAFT_133827
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_133827
03029 Mitochondrial biogenesis [BR:
fme03029
]
FOMMEDRAFT_133827
Peptidases and inhibitors [BR:
fme01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
FOMMEDRAFT_133827
Membrane trafficking [BR:
fme04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
FOMMEDRAFT_133827
Mitochondrial biogenesis [BR:
fme03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
FOMMEDRAFT_133827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
18671875
NCBI-ProteinID:
XP_007266198
JGI:
Fomme1_133827
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MTNNKPPRAPPTPSPTPAPHHGPKLPKFLQKATTRDRSKSVIDPIMQHSGSTSASADGSL
ASSSSSSGVISVGETSSSPPSLPSGSGSRHRGDRRTSKLKGTLKELKDDRIGQIGAHAQS
GRERELLDEDENGSMLGTEEMPVIVEPASPAPSSSRSRTRSERPLSASSSDSHPAVNYYP
SSHSTQRISEMSVGSRLSGWFSHTFSTSSTDLSLPNILANTTPLTGASKSKSGGLGILTA
AKHGKGHLDKAMRYLLDSDATPDKCTDPIWLLGVQHPGYEPPPPPPSQSSSAPPSGRRSS
LDIRRSSSIRNSVSSLRGATSSPEPSMVHPQKNPGANWPPGFYSDFSSRVWLTYRSHYPP
IRDQTLAQLEAEASGQIPLQPVSASPRKWHILGSGEKGWTSDSGWGCMLRTGQSLLANAL
IHLHLGRDWRRPPQPVYTVDYATYVKILTWFFDSTDIHCPFSVHRMALAGKDLGKDVGQW
FGPSTAAGAIKTVVHAFAEAGLGVSVATDGVVYETDVLAASNAGPYMYRHSRMATSSPST
RRRRSAQQQQSMMSIWGQRPVLVLVGIRLGIDCVNPVYYDAVKALFTFPQSVGIAGGRPS
SSYYFVGVQTDNLFYLDPHHSRPSVPFRPPPANVDMHNFNRNYGHTASLPADSPPSSYRE
VYTIHGTNTSRHVKASSSISSYASQSRMSPSNSQGSGSVSGQSLYGYGGLDLIQEHYVTS
YSPMELRTFHCDRVRKMPLSSLDPSMLIGFLCRDERDWKDLRERVTEMSRRYKAIFSIQD
EPPSWPSDSDEMGMESVSDVDIDMDEPADEVSLSPEPEDRDAGEGEASDNADAGRPTSRR
EDSGGRQSEEVTTEEDPLGPVTPGPSSATQDFHDQQGDKLAESMKAMDLEEDLLGDDEEW
VDPDPNLPAPTPRPREAPNYPVLPLSAVNSTATTASYVSASSSYSSLQIPQQSPSPGASG
SRRGSPGMSKESDKDNEAMKDEDKENKPQQRPSKIRTKKSTGKREASSAQSQAQEYVPFP
VVDDREPDDTDFYEVPSHSQSSSGFGHPGSGSGPGPRGRRRTGSGGSQNRTPIASVVTQT
DSTRLTTTTTSTTGNGNGNANGNGNGNSNGNTGYRIRNVFGRDGGRTQSGGVRGIVASDP
LDDASDS
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgactaacaacaagccaccacgcgcacctccgacaccgtcgccgacgcccgcaccacac
catgggccgaagctaccaaaattcctccagaaggcgacgacgcgcgacagaagcaagtcc
gtgatcgaccctattatgcagcacagtggaagcaccagtgcgagtgcagacggcagcctt
gccagctcgtcgtcaagttcgggtgtgatttctgttggtgagacttcgtcgtctcctccg
tcgctgccgagtggtagtggttcgcgacatcgtggcgatcgccgaacgagtaagttgaaa
ggcacgttgaaagagctcaaggacgacaggatcggccagattggtgcacacgcccagtct
ggccgcgagcgtgaactgctggatgaagatgagaatggatctatgcttgggacggaggaa
atgcctgttatcgttgagcccgcgtcccctgcaccaagttcatctcgctcacgcacgcgg
tccgagcgtccgctcagcgcgtcgtcttcggactcgcaccctgctgtcaattattatccc
tcctctcactctacacagcgcatttctgagatgagcgtgggctctcgcctatctggctgg
ttctctcatactttcagcacgtcatcaacggacctttcattgcccaatattctcgcaaat
acaacgcctttgactggtgcctcaaaatcaaagtctggtggactcggtatccttacggca
gcaaaacatggaaaggggcacttggacaaggccatgcggtacttactggacagcgatgct
actcctgacaaatgcacggatccaatttggcttcttggggtgcaacatcctggttacgag
ccgccgcctccacctccttctcagtcttcttctgcacctccttcggggcgccggagctcg
cttgacatccgccgttcatcttcaattcgcaattctgtgtcgtccttgcgtggagcgacc
tcctctcctgagccttccatggtacatccacagaagaaccctggtgcaaactggccacct
ggtttttactctgacttctcgtcccgagtctggttaacgtaccgaagccattatcctccc
attcgagatcagacgctcgcgcagctcgaggcggaagccagcggtcaaattcctctgcaa
cctgtgtcagcttcaccacgcaaatggcatatccttggaagtggtgagaagggctggacg
agtgactcgggatggggatgtatgcttcgtactggccaatcgttgctcgcaaatgctttg
attcatcttcatctcgggcgcgattggcgccgacctcctcagccagtgtatactgttgat
tatgcaacatatgtcaagatcctcacttggttcttcgactctacggacatacattgtccg
tttagtgtccaccgtatggccctcgctggaaaagatctgggaaaggacgtcggccaatgg
tttggtcccagtacggctgcgggtgctattaagaccgtcgtgcatgccttcgctgaagct
ggtcttggggtctctgttgcgactgatggtgtcgtgtacgagacggatgtgctcgcagct
tccaatgcggggccatacatgtatcggcattcacgaatggcaacatcctcgcccagcacg
cgacgacgacgcagtgcacagcaacagcagagtatgatgtctatttggggacaaaggcct
gtgcttgttctcgttggtatcagacttggaatcgattgtgttaacccggtatattacgac
gccgtgaaggcattatttaccttccctcaatccgtcggaattgctggcggtcgaccttct
tcatcgtactacttcgttggtgtgcaaacagataacctgttttaccttgatccacatcac
tctcgtccttctgtaccgttccgaccacctccggcaaacgtggatatgcataacttcaac
cgtaattacggccacactgcatcactaccagccgattcgcctccctcgtcatatcgtgaa
gtctatacaatacacggaactaacacgtctcgacatgtcaaggcctcatcttccatatca
tcttacgcttcacagagtcgcatgtcaccgtcaaactctcagggatcgggttctgtctca
gggcagagtctgtatggatatggtggtttggatctcatacaggaacattatgtaacatcg
tattcgccgatggaactgcgtacgttccactgcgatcgggtacgcaagatgccgctgtcg
agccttgatccgagtatgttgattgggttcttgtgtcgtgatgagcgtgattggaaagat
ttgagggaaagagttacggagatgtcacgaaggtacaaggcgatattttccattcaagac
gaaccgccatcgtggccgtcggattcagacgagatgggtatggagtccgtatcggatgtg
gatatcgacatggacgaaccagcagacgaagtctctctatctccagaacccgaagacaga
gatgccggagaaggcgaggcgtctgacaacgctgacgctggtagaccgacttcccgtcgt
gaagacagcggagggagacaaagtgaggaagtgactacagaagaagaccctcttggacca
gtcacacccggaccttcctctgcgactcaagatttccatgaccaacagggggataaactg
gcggaatcgatgaaggctatggaccttgaagaagacctgctaggtgatgatgaagaatgg
gttgatccggacccgaacttgcctgctcccacgccacggccacgtgaagcgccgaattac
cctgtcttgcctctgagcgctgtgaactcgactgcgacgactgcgtcgtacgtctctgcg
tcgtcgtcgtatagtagtttgcagatcccccagcagagtccaagtcctggtgcgtcgggg
agtaggagagggagtccaggtatgagcaaggaaagtgacaaagataacgaagcgatgaag
gacgaagataaggaaaacaagccacagcaaagaccctccaagattcgaacgaagaaatcg
acggggaaacgagaagcatcgtcggcccaatcacaggcgcaagaatacgtaccattccca
gttgtggacgatcgagaaccagacgacacagatttttatgaagtgccttcacattctcag
tcttcctcaggttttggacatcccgggtcgggatcaggtccaggtccgagggggagacga
cggacggggagtggagggagtcagaataggacgccgattgctagtgtggttacgcagacc
gactccacaaggttgacaacaacgacgacatcaacaacagggaatggcaatgggaatgca
aatgggaatgggaatgggaatagtaatggaaatacgggatatcggatacgaaatgttttt
gggagggatggtggacggacgcagagtggtggagtgcgtgggatcgttgcgtctgacccc
cttgatgatgcgagcgattcctag
DBGET
integrated database retrieval system
