Fomitiporia mediterranea: FOMMEDRAFT_134171
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Entry
FOMMEDRAFT_134171 CDS
T03132
Name
(RefSeq) UV excision repair protein Rad23
KO
K10839
UV excision repair protein RAD23
Organism
fme
Fomitiporia mediterranea
Pathway
fme03420
Nucleotide excision repair
fme04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FOMMEDRAFT_134171
09124 Replication and repair
03420 Nucleotide excision repair
FOMMEDRAFT_134171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
fme03051
]
FOMMEDRAFT_134171
03400 DNA repair and recombination proteins [BR:
fme03400
]
FOMMEDRAFT_134171
Proteasome [BR:
fme03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
FOMMEDRAFT_134171
DNA repair and recombination proteins [BR:
fme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
FOMMEDRAFT_134171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
ubiquitin
XPC-binding
UBA_7
Rad60-SLD
Rad60-SLD_2
UBQLN1
Dsc3_N
Ubiquitin_5
UBA_9
Motif
Other DBs
NCBI-GeneID:
18671904
NCBI-ProteinID:
XP_007266732
JGI:
Fomme1_134171
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MELTIKNLQGKVFKISDVEEEDTVASLKQKIAGQFQHPVELQKLIYSGKILQDDAQIKSY
NIKQTDFIVLMVSKPKAAPAPAAAPAPVAAKAPEATPATAPAPAPAAPVAATSTSAASST
SAPATASPAAATPQERAFGDTTSFLSGDALQASIQNMIEMGFERAQVMRAMKASFNNPDR
AVEYLMNGIPAHLDAESSAGPAGPAAPGAPATNPAPAPQQTAAPAPVPAAAPAQPAAAPA
PQPTAPQNLFQLAQQQQQHHGGGLPGGAAGLGATGAGIESLGGGDAQLGQFRNTVMQNPA
LLQPMIQQIAQSNPNLAQYLEQNPEALLQLLGAIGGEGGLEEGEGGEGGIPPGATVLQVT
PEERAAIERLEALGFPRQQVVEAYFACDKNEEMAANYLFENGFEDE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggagctcacgataaaaaacttacaaggaaaggtcttcaagatctccgacgtcgaggag
gaagatacagtcgcctcactcaaacagaaaattgccggacagttccagcacccagtagag
ctgcagaaactgatctactcaggcaagatactccaggatgacgctcagatcaagtcctat
aacattaagcaaaccgatttcattgtattgatggtctcaaagcccaaagccgctccggca
cctgccgccgctccagctcccgttgcagcaaaggcacccgaggccacacctgcgactgca
ccagcacctgctcctgccgctcccgtcgctgctacttcgacgtctgctgcatcgtcgaca
tcggcaccagctactgcatctcccgcggctgccactccccaggaacgcgccttcggcgac
actacttcattcttgagcggcgatgcccttcaagcatcaatacaaaacatgattgagatg
gggtttgagcgggcgcaggtaatgagagctatgaaggcaagctttaacaatccagatcgt
gccgttgagtatcttatgaatggcatacccgcacacctcgatgcggagtcgtccgctggt
cccgctggtcccgctgcacccggtgcacccgcgactaatccggctccagcgccccaacag
actgcggccccggcaccagtaccggcagcagcgccagctcaacctgcagctgctcccgca
cctcaacctaccgcacctcaaaacctgtttcagctcgcccagcaacaacagcaacaccac
ggtggtggcctcccaggtggtgcagctggcttaggcgcaactggagcggggattgagagt
ctcggtggtggcgacgcacaacttgggcaattccgcaatactgtaatgcagaaccccgcg
ctacttcaacctatgattcaacagattgcacaatccaacccgaatctcgctcaatacctt
gagcaaaaccccgaagcactgcttcagctgcttggtgctataggtggtgagggtggactc
gaggaaggtgaaggtggtgaaggtggcattccacctggcgcaactgtcttgcaggtaaca
ccagaggaacgtgccgctattgagagactcgaggcgctcggattcccacgacaacaagtg
gtggaagcctatttcgcatgcgataagaatgaggagatggcagcaaattatttgtttgaa
aacgggttcgaagacgagtaa
DBGET
integrated database retrieval system
