Fomitiporia mediterranea: FOMMEDRAFT_135096
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Entry
FOMMEDRAFT_135096 CDS
T03132
Name
(RefSeq) structural maintenance of chromosome protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
fme
Fomitiporia mediterranea
Pathway
fme04111
Cell cycle - yeast
fme04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
FOMMEDRAFT_135096
04113 Meiosis - yeast
FOMMEDRAFT_135096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_135096
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
fme00535
]
FOMMEDRAFT_135096
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
FOMMEDRAFT_135096
Meiosis-specific proteins
Cohesin complex and associated proteins
FOMMEDRAFT_135096
Proteoglycans [BR:
fme00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
FOMMEDRAFT_135096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
DUF7491
ABC_tran
Fib_alpha
AAA_29
GAS
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
18671961
NCBI-ProteinID:
XP_007268036
JGI:
Fomme1_135096
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MHIQTLTIQGFKSYRDRTEIEPFSPGHNVVVGRNGSGKSNFFAAIRFVLGDAYSSMSREE
RQALLHEGVSVTSTLSAYVEIVFTNQPARFPTPNPTVTIRRTIGLKKDEYTLDKKSASKA
DVMSLLESAGFSRANPYYIVPQGRITALTNAKDHERLALLKEVAGTKVYEQRRTESLRIM
DETSSKRQKISELLDYIDGRLNELEEEKEELKEYQEKDRERRCLEYALFERELQEVTGAL
EELEDERRGEVHGVNVRREAFNEREKEIQALEEEIKQTKHSTTTLSLSKHGFTSEINDLI
RSRTELECNIEDLQAAKERAGGKREELEAELEEVNAKIAEKEHTLQALNPRWDEHRAREA
EERLRLDEARAHLEMLYEKQGRLSRFRSRAERDQFLSAEIASLRAYKDKQSVNLRAAERD
LLASRDALAALSKKSEDVQGRLEDRRDKGRELSEELSKVKDKHAELLEKRKELWREDARL
TSTTGHAENELRQHERDLASMMDKDTGAGLRSVERIAERHGLRGVYGPLYKLFEVTDKKF
NTAVELTAGSSLFHVVVDTDETASRVLDIMLKEKTGRVTFMPLNRLKPKDVAYPNAPDAI
PLINKLRFDPIHEKAFKQVFGKTCVCRDLFIAAAYVRSHNLNTITLDGDKVDRKGSLTGG
YHDVRRSRIDTIRSVQSWREKYDSDKATLAEVKRGIVVIEQEITQLVGRIQVLTTQREKL
QNSRDPLVEEATSLTREHERLRDRISKGEQDVDELQAELAGLQVKINDQEQEMKTPMARG
LSPEEEMTIARLTKQVEARQATLVQLGKAKSELGSQKNLLEIELNESLRRRREELQAKLE
SLGEADSGAAFSADDYDARVRELKALNKSIPTLSDKCKDMDKESDKLSVKLQELRTKLEE
MQNQQSEDSKGISRQQKNTERYIAKKQMLINRKDDCNRNIRDLGVLPEEAFEKYTNDKLD
RLVKKLHTVNEGLKKFAHVNKKAFEQYNNFTKQRDQLLSRREELDKSAKSIEELIQVLDM
RKDEAIERTFKQVAKNFEEVFEKLVPAGKGRLIIQRRIDQDEDDMEEDEDTQRSSVDNYT
GVSIKVSFNSKVDEGLRIQQLSGGQKSLVALATVFAIQKCDPAPFYLFDEIDANLDAQYR
TAVASMIHELSASAQFITTTFRPEMLVTADKFYGVTFNNQKVSSIRSIRREEAQEFVDQV
RLDAK
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgcacatccaaaccctaacaattcagggtttcaagtcctatcgcgacaggacggaaatt
gagcccttctcacctggacacaatgtcgttgtcgggcgcaatggaagcgggaagagtaac
ttcttcgccgcgattcgatttgtcttgggagacgcatattcatctatgtcgcgtgaggaa
agacaagcattgttgcatgaaggcgtatccgtcacttcaacactctcggcttatgtcgaa
attgtgttcaccaatcagcctgctcgtttcccgaccccaaatcccaccgtaactattcga
cgaaccattggtcttaagaaagacgaatacacgttggataaaaagagcgcgtccaaggca
gatgtgatgagcttgctagaaagtgccgggttcagcagagcaaatccatattacatcgta
cctcaaggcagaattactgctcttacaaatgccaaggatcacgaacgccttgctctgctt
aaggaagtagccggaactaaagtgtacgaacagcgccgcaccgaatcgctccgaatcatg
gacgagacatcatcaaaacggcaaaagatcagcgaactccttgactacattgatggtcgt
ctaaacgaactagaagaggaaaaagaagagctgaaggaataccaagagaaggatcgagag
cgaagatgtctcgaatacgctctctttgagagggaattgcaagaggttactggtgctctc
gaagaattggaagatgaacggcggggagaagttcacggcgtgaatgtaaggcgcgaggca
tttaatgaacgagaaaaggaaatacaggcacttgaagaagaaatcaaacaaacgaagcat
agcactacgacgctttcgctgagcaagcatggctttactagcgagatcaacgaccttatc
cgatctcggacagagttagaatgtaatatcgaagacttacaagcagcgaaggagcgtgcc
ggtgggaaacgggaagaactggaggccgaacttgaagaagtcaacgctaagatagcagag
aaggagcatactctgcaagcactgaacccgcgatgggatgagcatcgagctcgagaagca
gaggaacgtcttcgcctcgacgaggctcgtgcccacctcgaaatgctctacgaaaaacag
ggtcgactaagtcgcttccgtagtcgcgcagaacgcgaccagttcctctcggctgagatc
gcttctcttcgtgcttacaaggacaagcaatcggtcaacttgagggccgcagagcgcgat
ctccttgcttcacgcgatgcattggctgcgctttccaaaaagtcggaagacgtacaagga
cgtttggaagaccgtcgcgataagggacgcgagttgtctgaagagctttctaaagtaaaa
gacaagcatgcagagctgttggaaaaaaggaaggagctttggcgtgaggatgccaggctc
acaagtacaactgggcacgctgagaatgaactgcgccagcatgagcgtgacttggcgagt
atgatggacaaggatacgggagccggcctacgatctgtagaaaggattgcggagcgacac
ggccttcgtggtgtttatggtcctctttacaaactattcgaggtaacagataagaaattt
aacacggccgtcgaactcaccgctggcagcagtctattccacgtagttgtggacacagat
gagacagcgtcgcgtgtactcgacatcatgttaaaggagaagacgggtcgtgtcacgttc
atgcccttgaaccgcctgaagccgaaggacgtcgcatatcccaatgcaccagatgccatc
ccactcatcaacaaattacggtttgatcccatacatgaaaaggcgttcaaacaagttttc
ggcaagacgtgcgtttgtcgtgaccttttcatcgccgcagcatatgtccgcagccacaat
ctcaacaccatcacgcttgatggagacaaagtcgaccgcaagggatcactaactggtggt
tatcatgatgtgcggcggtcacgtattgatacgattcgcagtgtgcagtcgtggcgtgag
aagtacgattcggacaaagcaacgcttgcggaggtcaaacgcgggattgtagtaattgaa
caggagatcacgcaacttgtcggtcgtatccaagtcctcaccacgcagagggagaaattg
caaaactctcgtgacccacttgtggaagaggctacctcgttaacaagagagcatgagcgc
ctgagggataggatttccaaaggagaacaggatgttgacgaacttcaagcagaacttgct
ggattgcaggtgaagattaacgaccaagagcaagaaatgaaaacgcccatggctaggggt
ctcagtcccgaggaggaaatgacgattgctcgattgacaaagcaagttgaagcacgacag
gcaactcttgtccaactaggcaaagctaaaagcgagctgggcagccagaagaatctcctt
gagattgagcttaatgagagtctccgccgtcgaagggaagaattgcaggcaaaactagaa
tctcttggagaagcggactctggggcagcatttagcgcagatgactatgacgcacgtgtc
cgagagctcaaggcattgaacaagtccattccaacattgtctgataaatgcaaagatatg
gacaaagagagtgataaactctctgtgaagttgcaagaactccggacgaagcttgaggag
atgcaaaaccaacaatcagaggacagcaaaggcatctcaaggcaacagaaaaacacggaa
cgatatatcgcaaagaagcagatgctgataaatcgtaaggatgattgtaatcgcaacatt
cgcgatcttggtgtattacctgaagaagcgtttgagaaatatacgaacgacaagcttgat
cggctcgtcaagaagctgcatacagtgaatgaaggcctgaagaagtttgcacatgtgaac
aagaaagcatttgagcagtataataacttcacgaagcagcgcgatcagctcctatctcgg
cgcgaagagctcgacaaatcagcgaagtccatcgaagagctcattcaggtgctcgatatg
cgcaaagatgaagcaattgagcggacattcaagcaggttgccaaaaacttcgaggaagtt
ttcgagaagcttgtacctgctggtaaggggcggcttatcatacagcgacgcattgatcag
gacgaggacgacatggaggaggatgaggatactcagcgatcttcggttgacaactatacg
ggagtttcgataaaggtgtcgtttaactcgaaggtcgatgagggtttgcgcatacagcaa
ttatctggtggtcagaagtcgctggtagcacttgccactgtctttgcaatccagaagtgt
gacccagccccgttctatttattcgacgaaattgatgcgaacctggatgctcagtaccga
acggcagtggcatctatgatccatgagctatctgcttccgcgcaattcattacgaccacg
ttccgcccagaaatgcttgtcaccgcggacaaattctacggtgtgacgtttaataatcaa
aaggttagctccattcggagcattcggagagaggaggcacaagaattcgttgatcaggta
cgtttggacgccaagtga
DBGET
integrated database retrieval system
