Fomitiporia mediterranea: FOMMEDRAFT_135868
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Entry
FOMMEDRAFT_135868 CDS
T03132
Name
(RefSeq) WD40 repeat-like protein
KO
K12602
WD repeat-containing protein 61
Organism
fme
Fomitiporia mediterranea
Pathway
fme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOMMEDRAFT_135868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_135868
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
FOMMEDRAFT_135868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_RFWD3
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR41
Tricorn_2nd
Beta-prop_TEP1_C
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_WDR11_2nd
Beta-prop_WDR35_TULP_N
Tricorn_N
Beta-prop_NUP159_NUP214
Beta-prop_ACSF4
PROPPIN
Cytochrom_D1
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_HPS5
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
18672010
NCBI-ProteinID:
XP_007269001
JGI:
Fomme1_135868
LinkDB
All DBs
Position
Unknown
AA seq
175 aa
AA seq
DB search
MLNQGKQEEPRLKSPDGTRIALSLETGQIYIFDLTSQSLISTYTAHATTVRSLAWSADSS
LLLSASDDRRLMLFDVRAGRGGGAGGGAVAPLVGHGSWVISTAFSPDGRLALSGSTDKTI
KVWDIAARAAVSTIQDTGEVWGVSWRPQVAPGSAGAFVSGGEDGVVRWWRSAGAS
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaccagggaaagcaagaagagccccggctgaagagtccagacggaacacgaata
gcactctccctcgaaacaggccaaatctacatcttcgacctaacctcccaatccctcata
tccacatacaccgcgcacgcaacgacagtccggtcactcgcatggtccgccgactcttcg
ctcctcctatctgcttcagatgatcgacgacttatgttgtttgacgtgcgtgctggtcgc
ggaggtggtgcgggcggaggagcggttgcgccgcttgtagggcatggctcgtgggttata
agtacggcgttctcgcctgatgggcggttggcactatccgggtcgacagataagacgatt
aaagtatgggacattgcagcgcgtgcagcagtctcaacgattcaggatactggggaagtg
tggggcgtatcatggcgaccacaggttgcacctggttcagctggagcgttcgtctcaggc
ggtgaagatggcgtcgtaaggtggtggagaagcgctggtgcaagttga
DBGET
integrated database retrieval system