Fomitiporia mediterranea: FOMMEDRAFT_137223
Help
Entry
FOMMEDRAFT_137223 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fme04121
]
FOMMEDRAFT_137223
Ubiquitin system [BR:
fme04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
FOMMEDRAFT_137223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_DCAF4
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_Nup120_160
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
18672116
NCBI-ProteinID:
XP_007271691
JGI:
Fomme1_137223
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MSRGGKPLDLPGLYWDDEKKRYFPIASRPKRKTTDEGPRETPYKVSDDNRRQTEGHRSAA
TATYPRALRIGTKGYSQRARITQELEGKSLVASYTELDPPVRPLSWQTCQISSFHAATVD
DTLNVLVGDSRGVFHCSRAVIKSLLRINAGPDRFNDNSRLFTSYHLGSGTPVSHITRSGN
IAVAVTSTCDSCFLGVRDLNASDYSGVLFPRLNVAGDIRAADLLNKSLALGMSRKLVWIK
DVSGPIKGHRTLQTKSDILSIAQSSNTITAGLRNGEVRLFDVRTRGDASTELFGSRFSRK
IDTSPPSLPGTKPKGTHSAITRLQTVGDWEMLVATSAGELEMFDLRFATGNRVQPIIKYD
GHVNSYLLDLGITIDPTSSFLFAEGQDRRIRAWVLQTGEQLGVLLGGAQLARPARALAVT
QTANETRGARWLWIPQEEEIRVVRLGGPIR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcggtggcaaacctctggacctgccaggactctactgggacgatgaaaagaag
cgatatttcccaattgcttccaggccgaaacgaaaaactacagacgaaggacctagagaa
acaccttataaagtatcagatgataatagacgacaaactgaaggacatcgatcagctgct
accgccacatatccaagagcattgcgcataggaacgaaaggctactctcaaagagctcga
atcacgcaagaattagaagggaagtcactggtggcttcatatacagagctcgatccaccc
gtccgaccgctgtcctggcagacatgtcaaatatcatctttccacgctgctactgttgat
gataccctgaacgtgctcgtcggtgattcccgtggtgtgttccactgctctcgggcagtc
atcaagtctcttttaagaataaacgccgggcctgaccggtttaacgacaattcacgactt
tttacgtcttaccatttgggatcgggaacgcccgtctcacacattacgaggtctggaaac
atcgcagttgctgtaaccagtacatgtgattcgtgcttcctcggtgttcgtgatctaaat
gcctcggattattctggcgttctatttccacgcttgaatgtagccggggatatacgagct
gcagatcttttaaacaagagtctggctcttggtatgtcccggaaactagtatggattaag
gatgttagcgggcccatcaagggtcaccgaacccttcaaactaagagtgacatcttgtca
atagcacaaagctcgaacactatcaccgccggattgagaaacggagaagtgcgattattc
gacgtgcgtactcgcggtgatgcgagtaccgagctatttgggtcccgtttctccaggaaa
atcgacacaagccctccgtcattacctgggacaaagcccaagggtacacattccgcaata
acacgcttacaaacagtcggagattgggaaatgcttgtcgcaacaagtgccggagagctt
gagatgttcgacctacgcttcgctacaggtaatagagtacaacctataataaaatacgac
ggacacgtcaattcgtaccttctcgatctcggaatcacgatcgaccctacctcatccttc
ctattcgccgaaggccaagaccgtaggatccgtgcttgggtattacaaacaggcgaacag
cttggtgtactccttggtggtgctcaactagctagacctgctcgtgcgttggcagtaact
cagacggctaacgagactcgtggagcgaggtggttatggataccgcaagaggaagagatt
cgcgtggtccgtttgggtggtccaattcgatag
DBGET
integrated database retrieval system
