Fomitiporia mediterranea: FOMMEDRAFT_137702
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Entry
FOMMEDRAFT_137702 CDS
T03132
Name
(RefSeq) DNase I-like protein
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fme03400
]
FOMMEDRAFT_137702
Enzymes [BR:
fme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FOMMEDRAFT_137702
DNA repair and recombination proteins [BR:
fme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FOMMEDRAFT_137702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
DUF943
Motif
Other DBs
NCBI-GeneID:
18672152
NCBI-ProteinID:
XP_007261314
JGI:
Fomme1_137702
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MRLLTWNINGIRTLPQYHPWNTLKSGDGILNELGADIICFQEVKSTRQTIDKSVALPESY
DAFFSFPAIKGGYSGVSVCTKSSRVVPLKAEEGISGRLQSGLKPPLSAEERISQVIPDAH
EMVLLEDEASKTHMDLIELDKEGRALMLDFGLFVLINVYCPNETSDARLPYKMNFHLLLQ
ERVRLLTEVDKREVIVVGDINVCAAPIDHCDGELPSNKEEFWVHPARKWFHEWLHPIGPM
YDIVRNCWPERKGMYTCWNQKIDARTTNYGTRIDYFLLTKGLLPWFKHGDIQAHVKGSDH
CPVYIDLHDQITDEGGDTLYLKDMLKMNGEKRDPPRLATKFWVEYSGKQQVLSSFFGKKA
ATASESDLAIASTVSIRPASGKSSTVASTPATTDSGKTREIESREISKADESKSYNQEAI
FPPPVPEEKIARSSTSSNLTIISSTNDPHSNGSLSSATVAAEAAPPLKRKKMQADSNYPA
QAPKKSKKGNSAPKLKGKESTTAQMKLSSFFSGPTSSQSQADVDDKEEESPIRSQKSEVI
DVDALLNDSDALTVQSEVQLSPPVTVPGSSRTEKGNNSHTWSTLFARIEPPKCVVHGEAC
REFTVNKPGPNKGKAFFICARPVGPGYDAGKDRRLREEVNSQYRCNFFKWSSEVKREALR
EADKRNGKS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctcacatggaacataaacggaattcgcactcttccacagtatcatccttgg
aacacactcaagtctggagacggtatcctcaatgagctaggtgcggatattatttgcttc
caagaggtcaaatccacgcgtcaaaccatagacaaaagtgtcgctctgccagagtcctac
gatgctttcttttccttccccgctataaaaggaggttacagtggtgtcagcgtctgtacc
aagtcttcgcgggttgtgccgctcaaggcagaagaaggcatctcgggacgcttacagtct
gggctgaagcctcctttatccgcagaagagcgaatatctcaagtcattccggacgcacat
gagatggtacttttggaagatgaagcatcaaagacacatatggatctaatagaattagac
aaggaaggccgggctctcatgctcgatttcggactcttcgttctcatcaacgtttattgt
cccaacgaaacgtcggatgctcggctgccatataaaatgaattttcaccttttgcttcag
gagcgggtacgcctacttacggaggtcgacaagcgggaggttattgtcgttggagacatt
aatgtctgtgctgcccctatcgatcactgcgacggtgagcttccgagtaacaaggaagag
ttctgggtacatccagcgcgaaaatggtttcacgagtggcttcatcctataggtcccatg
tacgatattgtacggaactgttggccggaaagaaagggaatgtatacctgttggaaccag
aagatagacgctcggacaactaactacggcacccggattgactatttccttctcactaag
ggtctactaccatggtttaagcatggtgatatccaagcccacgtgaagggctctgaccat
tgcccagtatatattgacctacacgaccaaattacggacgaaggcggcgacacactgtac
ttaaaagatatgctcaagatgaatggcgaaaaacgcgatccgccgagactggcaaccaag
ttctgggtggaatattcaggcaaacaacaagtattgtcgagtttcttcggaaagaaagct
gcaacagcttcagagtcggatttggcgattgcctcaaccgtttctatccgtccagcgtct
gggaagtcgagtacagtcgcttctacacctgcaaccacagattctgggaaaacgagagag
attgagtcccgcgaaatatcaaaggcagatgaatccaagtcgtataaccaagaggctata
tttcctccgcctgtacccgaagaaaagatagcgaggtcgtccacttcatcaaatctcacc
atcatatcctctaccaatgaccctcattcgaatggatcgcttagctctgcaactgtggct
gcggaggctgcaccacctctgaaacgtaaaaaaatgcaagccgacagtaactaccctgca
caagcacccaagaaatcaaagaagggtaactccgccccaaagttaaaaggaaaagaaagt
acgactgcccagatgaaactgtcttctttcttctctggcccgacgtcttcgcaaagccag
gccgacgtagatgacaaggaagaagaaagtccaatccgatcacaaaagtcggaagtcatt
gatgttgatgcacttctgaacgattcggacgctttaactgttcagtcagaagtgcaatta
tcgcctccggtgactgtgcctgggtcgtcgcggacggaaaaggggaataattcgcataca
tggtctacactcttcgcacgtattgagccgccgaaatgcgtcgtacatggtgaggcttgc
agggaatttacagtgaacaaacctggccctaataaagggaaagcattctttatttgcgct
cgacccgtaggaccaggatacgatgctggaaaagataggcgactacgagaagaagtaaac
tctcagtacagatgtaatttcttcaagtggagtagtgaagtgaaaagggaggctctgcgt
gaagcggataaaaggaacgggaaaagctga
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