Fomitiporia mediterranea: FOMMEDRAFT_137775
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Entry
FOMMEDRAFT_137775 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOMMEDRAFT_137775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fme03032
]
FOMMEDRAFT_137775
Enzymes [BR:
fme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOMMEDRAFT_137775
DNA replication proteins [BR:
fme03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
FOMMEDRAFT_137775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
OTT_1508_deam
Motif
Other DBs
NCBI-GeneID:
18672161
NCBI-ProteinID:
XP_007261424
JGI:
Fomme1_137775
LinkDB
All DBs
Position
Unknown
AA seq
1441 aa
AA seq
DB search
MSHRRKNAKPDKLAAYKRAREGGGRDWKPEEDVEVYDEVDEEQYKSIVKGRLQRDDFIVD
DGVDGYADNGMDDWGEDQGMESDEEVKPKEKKKSKLVKTKPAPPPPPVATFNDYKQKPSA
AVEDDFMSSLLGKMEKVTPDTRFRSRKRKPRDISPLTSSSPDDFNGYRAPGDFYADTSSD
GPIDEYSVPPSDDLDISGPFKRQRREDADVKPAVQKFKIFNVATSSEGLSTPYDDSLDDI
DMSEFTHDEEELKPKIEIVKMEDDDMDLLNHRHAKESNAVNNVKVEKMEDETPSWVNVHA
SLKVEKNDDSLGPLGGRSANVRSSNVAALEDDGSLRFFWIDYLEQDGNVHFIGKLKDKKT
KLWVSCCLTVENLERNLFVLSRPKKLEDGHETDIVPDNLDVAKDFDALRKKAGINKFKSK
FVKRKYAFGEPDVPLNEHSWMKVKYPFSEPQLSENLQTDTIARIFGTRTSAFELLVLKRK
IMGPCWLQIKEPHVEHKGISWCKFEATVSNPKDINPFPETDADAPKETPPLTVMSLTVRT
VVNYKENKREVVCATARTWSDLDLEDPTPPDQLSCTVHTLVRPLVKFPARFQDAVKSNKK
GTILAEANERALLNNLLLTIFRTDPDVIVGHEFLGVSLDVLLDRMRDQKLKDWSRIGRFR
RTRWPNIGKQGTNIKFLNGRLLCDLASDGAKGMISSTTWSMTEMCATHLKCEREDIDPDE
VADYFDGNLSTPDKLIRFVQHCELDAHYQMAIAARVQILPLTKQLTNLAGNSWNKTLNGG
RAERNEYILLHEFHRLKYICPDKTFGKKVAAAAAVKAEAEGDGVVPVTQKSKRDKYKGGL
VFEPKRGLWDKYILVMDFNSLYPSIIQEYNIDFTTVERADSEEGEEEKIPDPPSSDVPQG
VLPRLIATLVARRREVKKLMKDRSTPHAKMLQYDIKQQALKLTANSMYGCLGFEYSRFYA
RPLAALTTYKGREILARTRELAENQGLDVIYGDTDSIFVNSNVTELPQALRISDTFKKLV
NEQYVKLEIDLDGIFQRLLLLQKKKYAALKVEDAERTSVEVKGLDMKRREYCQLSKDTSH
HILEMVLSGEATETVVEQIHEHLSKLGEEVRGDKINLDKFIINKRLGKNPEDYPDAKSQP
HVTVALRLKSKGQQPRAGDVIPYIFCLNEGAESMKSAQADRAHHPDELRRANGELKIDYE
FYLSQQILPPIERLCEPIEGTDRARLAECLGLDPGRFRSHYNGDSDDRAFGTLESQMPDN
VRFKDCDPLTIRCRKCEGEMPFTHISERGTSIIQTSGPTCKGCQAPLKTTSMQMQLENQI
REHINRYYEGWTVCDDPMCRNRTRMMSVYGRRCLKRECKGTVAFEYSDNQLYTQLMFYSS
LVCPEKVLKSAIASPQKSTIDAAVQNNRKLLDDMNEIVDKYLSQCGRRWVELGNLFSFMK
L
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaccgtcgcaaaaacgcgaaacccgacaagcttgctgcttataaacgcgccaga
gaaggcgggggtcgagactggaagccagaagaggacgttgaggtgtatgacgaagtggac
gaggagcaatacaagtccatcgtgaaggggagacttcagagagatgatttcatcgttgac
gatggagtagacgggtatgccgacaatggcatggatgactggggtgaggatcaaggaatg
gagtccgacgaagaagtgaaaccgaaagaaaagaaaaaatcgaaactcgtgaagacgaaa
cccgctccgcctcctccgccagttgcaaccttcaatgactataagcagaagccatcagct
gctgttgaagacgacttcatgtcgtcgctgctgggaaaaatggaaaaggttacgccggac
acgcgctttcgatcgagaaagcgaaagccgcgtgatatctcccccctgacctcgtcttct
ccggacgatttcaatgggtacagagcgcccggggacttttacgcggacacgtcctctgac
ggcccaattgacgaatactcagtgccgccgagcgacgacttggatatctcaggacccttc
aaacggcagagaagagaagacgcagacgtcaagccagcggtacagaagttcaaaattttc
aatgttgccacgagctcggagggtctcagcacgccttatgatgactcactcgacgatatt
gacatgagcgaatttactcatgatgaagaggagctgaagccgaagatcgaaattgtgaaa
atggaggacgacgacatggatcttctcaaccaccgccacgcaaaggaatcaaatgcggtg
aataacgtaaaggtcgagaaaatggaggatgaaacgccttcttgggtaaacgtacatgct
tcgttgaaagtcgaaaagaatgacgactcccttggccctttgggtggacgtagtgcaaac
gtgcgttcttccaacgttgcggctttggaagacgatgggtcgctgcggttcttctggatt
gattatctagagcaagacgggaatgttcatttcattggtaagctcaaggataagaagacg
aaactctgggtcagttgctgtcttacggtagaaaatttggagcgtaacctctttgttctg
tcgcgtccgaagaaactagaggatggccacgagacggacatcgtcccagacaatcttgat
gttgccaaagatttcgatgctttgcggaagaaagctggaataaataagtttaagagcaaa
ttcgtcaaacgaaaatacgcctttggagaaccggatgtgcctctgaatgaacacagctgg
atgaaagtcaaatatccgttttctgaaccacaattatcagaaaatttacaaactgatacc
attgcgcgaatcttcggcacgaggacgagcgcattcgaactgctcgtgttaaagagaaag
attatgggaccatgctggctgcaaattaaagagcctcatgttgagcacaaaggcatatcc
tggtgtaaatttgaagccacggtctccaatccgaaggatatcaacccattccccgaaacc
gatgcggacgcgccaaaggaaacgccaccattgacggttatgagccttactgtacgtaca
gtcgtcaattacaaggaaaacaagagggaagtagtttgtgcgactgcacgtacatggtcg
gacctggatcttgaggatccgactccacctgatcaactgtcctgcaccgtgcacacgctt
gttaggccactggtcaaattcccagctagatttcaagatgccgttaagtcgaacaagaag
ggaacgatccttgcagaggcaaacgagagggcactgctcaataacctcctgctaacgata
ttcaggacggatcccgatgttatcgttggccatgaatttctcggcgtgtcattagatgtt
ctattagatcgcatgcgtgaccaaaaattaaaagactggtcaaggataggccgtttcaga
aggacgaggtggccgaacattgggaaacaaggaactaacatcaaattcctgaatgggagg
ttgttgtgcgaccttgctagcgacggtgccaaaggcatgatttcgtcaactacatggtcg
atgacggagatgtgcgcaacgcacttgaaatgtgaacgcgaagacattgatccagatgaa
gtggccgattacttcgatggtaatctgtcgacaccggacaaactcattaggtttgtgcag
cattgcgagcttgatgctcattatcaaatggccattgctgctcgagtgcaaattcttccg
ctaacgaagcaattgacaaaccttgccggaaattcctggaacaagacactgaatggcggt
cgtgctgagcgaaacgagtacatcttgcttcacgaattccatcgtctgaaatacatttgc
cctgataaaactttcggcaagaaggttgctgctgctgctgccgtgaaggccgaagctgaa
ggagacggagtagtcccagtgacacaaaaaagtaagagggacaagtataagggcggcctg
gtcttcgagccgaagcgtggcttgtgggacaagtacattcttgtcatggacttcaactcg
ttgtacccgagcattatccaggaatacaacattgacttcaccactgtagaaagggccgat
agtgaggagggagaagaagagaagatccccgatccaccatcgtctgatgtcccccaagga
gtgcttccaaggctcatcgctactctcgttgctaggcgaagggaagtcaaaaagctaatg
aaggatcgctcgacaccacatgctaagatgctccagtacgatatcaagcagcaagccctc
aaactcacagccaatagtatgtacgggtgcctcggattcgagtattcaaggttctatgct
cgacctcttgctgcactcacgacctataaaggacgtgagattctggctaggacacgagaa
ttagcggaaaaccagggtctcgacgtcatttatggcgatacagattccatcttcgtcaat
tctaatgtcacggagttgcctcaagcgctaaggatatcagacaccttcaagaaactggtc
aacgaacaatatgtgaagctcgagattgacttggatggtatcttccaacgtctgcttctc
ctacaaaagaagaagtatgctgcgctcaaggtggaagacgcagagcggacttctgtcgaa
gtaaagggcttggacatgaagcgtcgagaatattgtcagctctcgaaagatacctctcac
catatcttggaaatggttttgtctggcgaagctacggaaacagttgtcgaacagatccac
gagcatctatcaaagctcggtgaagaggttcgcggtgacaagatcaacttggataagttc
attatcaacaagcgtcttggtaaaaatcctgaagactatccggacgcgaagagtcaacca
catgtcaccgtcgcgttacgtttgaagtcgaagggccagcaacctagagcaggggatgtc
attccatatatattttgcctaaacgaaggtgccgaatcgatgaagtctgctcaggcagat
agggcacatcaccctgacgagctcagaagggcaaacggagagctgaaaatagactatgag
ttttacctctcacagcaaatccttccgcctattgaacgtctctgtgagcctatcgaaggc
accgatagagcacgtctcgcggaatgtcttggcctcgacccaggccgcttccgttcacat
tacaatggtgactcggacgaccgtgcatttggcacgctagagtcgcaaatgcctgataac
gtcaggttcaaagattgtgacccattaacgatccgatgccgaaagtgcgagggtgaaatg
ccattcacacatatctcggaacgagggacgtccataatacaaacgtccggaccgacctgc
aaaggctgtcaagctccactaaagacgacgagcatgcaaatgcagctcgaaaaccaaata
cgggagcatatcaatagatactacgaaggctggactgtttgcgatgatccaatgtgccgc
aatcgtacacgcatgatgagcgtgtatggtagacgctgcctgaagagggaatgcaaaggc
acagtggctttcgagtactccgataatcagctgtatacccaactgatgttctactcgagt
cttgtttgccctgagaaggttctgaagtctgcaatcgctagtcctcaaaagagtaccatt
gatgccgctgtccagaacaatcggaaacttctagatgacatgaacgagattgttgataaa
tacttgtcacaatgtggacggagatgggtggagcttggcaatctcttctcgttcatgaag
ctctag
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integrated database retrieval system
