KEGG   Fomitiporia mediterranea: FOMMEDRAFT_138213
Entry
FOMMEDRAFT_138213 CDS       T03132                                 
Name
(RefSeq) pseudouridine synthase
  KO
K15454  tRNA pseudouridine32 synthase [EC:5.4.99.28]
Organism
fme  Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:fme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fme03016]
    FOMMEDRAFT_138213
Enzymes [BR:fme01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     FOMMEDRAFT_138213
Transfer RNA biogenesis [BR:fme03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    FOMMEDRAFT_138213
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-GeneID: 18672235
NCBI-ProteinID: XP_007262303
JGI: Fomme1_138213
LinkDB
Position
Unknown
AA seq 586 aa
MTSKGRPGLKKIPAYWYPYRTNAKARWFDREILEVISTEFRDRSVEYYRYALQSGVTTIN
GEIARPGTLVRNGDTLENIVHRHEPPVTSTPVEILHHDIEREFIVINKPGSIPVHAAGRY
FKNSLVEILKDDFGFSNVYTVNRLDRLTSGLMIIALSSERARSLTSEFTSGTIQKEYVAR
VRGEFPAEEITCEEPLLTVDRQMGLNIVHPEGKEAKTMFKRMHYDKITDTSVVHCRPITG
RSHQIRVHLQFLGHPIANDAVYGDARVWGENVAKGGIDITPSEERRAPQPPPGLEDSTAE
GLGRRPDSEFVPLTDHESISTGAGSRPAHEEQKKSEPSSSGPNHIPGSLKRTKKRNDRRF
NPAWRTKEESAALTAKHTGEAPAPGELPRETGHDIGLGSPVPLSKEAVEIITRLRNQKDE
DEDWGRWRDVVFRAKGALTPQVVQLAYAQQNTPPRKSRKKLERQSTKKEPKSRRDEEINA
TESASAPSPTTITQLIPTQDQTDPVPESSETIELSISTPIQAPTNLAGPENSSDALYCPE
CYLPLCPDPKPEKLYIFLHALRYTSASLGSFETRLPEWAAEGYVWE
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgacttctaagggcagaccaggtctaaagaaaataccagcatattggtatccgtataga
acgaatgccaaggcccgttggtttgacagggagatcttggaagtcatctctactgagttt
cgagacaggagtgttgaatactatcgttatgccttgcaatctggtgtaactacgatcaat
ggcgaaattgcacgccctggtacccttgttcgcaatggggacacgcttgaaaatattgtg
catagacacgaaccacccgtaacgtccacaccagtcgagattcttcaccatgacattgag
cgggaattcattgtcataaacaagcccggcagcattcccgttcatgccgcaggtcggtac
ttcaagaactctctcgtggaaattctcaaagatgacttcgggttctcaaatgtctatacg
gtaaatcgtcttgatcgattgacgtcgggactgatgatcatcgcattgtcatcggaacgt
gcccgttcactcacatcggagttcacctccgggacaatccagaaggaatacgtcgcgcga
gttcgcggagagtttcccgcagaggagattacttgcgaagagccgcttttgacggtcgac
cggcagatgggtctgaacatcgtgcatccggagggaaaggaggcgaagacaatgtttaaa
cgcatgcattacgacaagatcaccgatactagtgtagttcattgtcgtccgattactgga
cgatcacaccagattcgtgtacacctgcaattcttaggacatcccattgcaaacgacgct
gtttacggggatgcaagggtttggggcgaaaacgtcgccaaaggaggcatcgatatcact
cctagcgaagagcgccgagcaccccaacctccacctggtctggaggattcgactgcagaa
gggctagggcgcaggccagatagcgaatttgttcctctgacagatcacgaatcgatcagt
acgggagctggatccagacctgcacatgaggagcagaaaaaatctgaaccatcatcgtca
ggaccaaaccatatccccggctctctgaaacgtacgaaaaaaaggaatgataggcgattc
aaccctgcgtggcgcacgaaagaagagtctgctgcattgaccgcaaagcacactggagaa
gcaccggcaccaggtgaactaccccgagaaactgggcacgatatcgggctcggctctccc
gtacctttgtcaaaagaggctgttgaaataataactcgactgaggaaccagaaggatgaa
gatgaagattggggccggtggcgggatgttgttttccgtgcgaaaggtgccctaacgcca
caagttgtgcaactcgcttacgcacaacagaatactccgccgagaaaatctagaaagaaa
ttggaaaggcagtcgacgaagaaggaacctaagagcagacgtgatgaagagatcaatgct
actgaatcagcatctgctccttcacctaccacgatcactcaactaattcctactcaagac
cagacagacccagtccccgagtcatctgagacgatcgaattgtccatttccacgccgatt
caagcacctacgaatctagccgggcctgagaattcatctgacgcgctctattgtccggaa
tgctacctacctctatgtccggacccgaaaccggagaaactatacatcttcttacacgca
ctgcgttacacaagtgccagtcttggttcatttgagacccgtcttcctgaatgggctgca
gagggttatgtctgggagtga

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