KEGG   Fomitiporia mediterranea: FOMMEDRAFT_138263
Entry
FOMMEDRAFT_138263 CDS       T03132                                 
Name
(RefSeq) DUF1744-domain-containing protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
fme  Fomitiporia mediterranea
Pathway
fme03030  DNA replication
fme03410  Base excision repair
fme03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FOMMEDRAFT_138263
   03410 Base excision repair
    FOMMEDRAFT_138263
   03420 Nucleotide excision repair
    FOMMEDRAFT_138263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fme03032]
    FOMMEDRAFT_138263
   03400 DNA repair and recombination proteins [BR:fme03400]
    FOMMEDRAFT_138263
Enzymes [BR:fme01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FOMMEDRAFT_138263
DNA replication proteins [BR:fme03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    FOMMEDRAFT_138263
DNA repair and recombination proteins [BR:fme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      FOMMEDRAFT_138263
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 18672243
NCBI-ProteinID: XP_007262432
JGI: Fomme1_138263
LinkDB
Position
Unknown
AA seq 2060 aa
MGHRRLYLQLCFRNVSDLLAVRREIVPLAMENGAKLSAVDAYAEVVNMSESNMQVEVETS
WAAEADALNGQSKSAKDIDPRDAIIDVREFDVPYYLRVAIDNELRVGLWYNVSFTAGQPQ
FSQMDRVKRPDPVVLAYDIETTKAPLKFPDSATDQVMMISYMIDGQGFLITNREIVSEDI
DDFEYTPKEGLEGPFTIFNEPDEAATITRFFQHFQEVKPTVVATFNGDFFDFPFLCARAM
VHGIDMFLEIGFSKDSEDEYKSRTCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYDPI
ELDPELMTPYAMEQPQTLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPDEVLRKGT
GTLCETLLMVEAYRGHIIMPNRHEDPHGNMFEGHLLSSETYVGGHVEALEAGVFRSDIPT
NFKIVPEAAQKLIDELDAALTFCIVEESKCSMDDVVNYEQVKGQIQAALELMRDKPLRFD
KPLIYHLDVAAMYPNIMLSNRLQPDSVVDESVCAVCDYNRPGKTCDRRMTWAWRGEYFPA
QRDEYNMVRHALNQEQFPAKRPGGPQRRFNELSPAEQSALLHKRLGDYSRKVYKKTKETR
IVQRETIICQRENPFYVDTVRRFRDRRYEYKGLHKTWKKNLDGLGSNGAVAEVEEAKKMI
VIYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGITCLTGATIIQMARQLVEQIGRPLE
LDTDGIWCMLPEVFPENFKFQLANGKTIGFSYPCTMLNHLVHAKFTNHQYHDLDPETSQY
KVHSENSIFFELDGPYKAMILPSSKEEDKLLKKRYAVFNDDGSLAELKGFEVKRRGELQL
IKIFQSQIFEKFLLGSTTQECYAAVAEIADRWLDVLYSRAESLSDEELVELIAENRSMSR
TLAEYAGQKSTSISTARRLAEFLGDQMVKDKGLACKFVISAKPIGAPVTERAVPIAIFSA
EESVKRTYLRKWLKDNSLASFDLRAILDWDYYIERLGSVIQKLITIPAAMQKVPNPVPRI
RHPDWLHRRVVALDDKFKQHKVTDFFKKSLADESHTQPQNLPDFEDLTLEDGDRPSSDRI
AITKKASRKITENNDLPVSETRLPNPYKNYPKWLKAVKKRWRAQLEARDNEDPSMAVPSM
FRGVRSVITRHWDIVQIRSISRGRFTMWLCVNAELIPVTLRIPREFYLNFKAPPGRDEFE
EHYIRDRVIRTLPRDRPCFHLYKYSMSEETFLNGESHFTNEINNPNVDGAYELQVPLVVR
ALVKLGTTCITDQKGLTLNRARDNGVDLWQMDRSMPSPLRKPYLDSGKPLKYLFLYHAYT
ASAPVHVYALFLPNGTVKLHVVDSATRRQLIPRFENAYEDLLAKKRSDLSKFSTYVYPDA
LRSSTDYHSNETTALKAISRELGALEKKSFTIVLSSAKDFTYFSSSVPKLNRFPVLRMPS
TKASHILDIFPWQSAIAKKMFLRYFSLAPWLQRTIAQAAYYDIPVGHIEDDQPLFFCDIE
LARRLSAQDMVLWWSAGEKPDLGGFENDMPPAEELTNPEFLSPGLYSKVCLSIQVGNLAI
DSVLQSALVNELEGSGGTTAFDSTSHTLDDYSTGDAQPNVTLGDSNLSPQMFAIIKQMVR
AWLLDKARDSNSPVSVTLDHFWRWVSSSSAMMYEPSVQRFIHGLMRKTFIQLLAEFKRLG
SNVVYADFSRILLVTSKPPGTAHAYATYITTAVTSHDLFKHIYLRTERFYDFLLYMDPAN
YGAVVCEDPLAIEPPKQIAISSTWNINKFLPPAVQGHFRTVVRYFIAQMAKIRREVEQNT
RTPLRVVQNLGPDVTQRDTGKIKEIDESKVFIAQKLTRRMLQVVSVIQDEHKRSIMDEGE
SPEYAFPVLPGSYLHMTEPTLEFIKFSCAVFSLAQDYQIEIGLMKRNLLELVGVREFSDQ
ALFRNPCDPLKLSMVTCCYCDHIRDFDFCRDDDLLPTSLEQAKWYCPECDGEYDRTAIEF
ALIQHLHRLERNFVQQDLRCARCKQIQSDNVSRHCECSGNYQLTTSKADVRRKLRTIINV
AITHNLTRLKECAQLMYGNW
NT seq 6183 nt   +upstreamnt  +downstreamnt
atgggtcatcgacgcttatatctccaactctgcttccgcaatgtctcagatcttctcgca
gtacgccgcgaaattgttcccttggcgatggaaaatggtgcaaaactcagtgcagtcgat
gcatacgccgaagttgtcaacatgtcagaatcaaacatgcaggtggaggtcgagacctcg
tgggccgcggaagcagatgctttgaatggccagtccaagagcgcaaaagatatagatcct
cgtgatgccataatagacgtgcgcgagtttgacgttccgtattatcttcgtgtcgcgatc
gataacgaacttcgagttggtttgtggtacaatgtctcgttcacggctggccagccgcaa
ttctcgcaaatggaccgcgtgaagcgacctgatcccgtcgttcttgcatatgatattgag
acaactaaagcgccgctcaagtttcccgatagtgcaacagaccaagtcatgatgatttca
tacatgattgacggccaggggtttctcatcacgaatcgcgaaattgtcagtgaagacatc
gatgatttcgaatatacgccgaaggaaggattagaagggccattcactatctttaacgaa
cccgatgaggcagcgactatcacgagattcttccaacacttccaagaagtcaaaccaact
gtcgtagcgacattcaacggtgacttcttcgattttcccttcctctgtgcacgggcaatg
gtgcatgggattgatatgttccttgaaattggattctcaaaggactcggaagacgaatat
aagagccgtacctgcgtgcacatggactgtttccgttgggtgaagcgtgattcgtacctg
ccccaaggtagtcaaggtcttaaggccgtcacgactgcaaaactgggctatgatcctatt
gaattggaccctgaacttatgacgccttatgcaatggaacaaccgcagactctcgcccag
tactcagtttccgatgccgtggcgacttattatctgtacatgaaatatgtgcaccctttc
attttctcactgtgtaacataattccgctcaatcccgatgaagtgttaaggaaagggacc
ggaacgctctgtgagacgctattgatggtggaggcgtatagaggtcacatcatcatgccg
aacagacatgaagatcctcatggcaatatgtttgagggacacctgctttcatccgaaact
tacgtcggtgggcacgtcgaggctctggaggccggagttttcagaagtgatatcccgact
aactttaaaattgttccggaggcagcacagaagctcatcgacgaacttgatgcagctctg
acattctgtattgttgaagaatccaaatgttcaatggacgatgttgtaaactacgagcag
gtcaaaggccagattcaggccgctcttgaactcatgcgtgacaaacccctgcgattcgat
aagccgcttatataccatttggacgttgctgcgatgtatcccaacatcatgttgtcgaat
cgacttcaacctgactccgtggtcgacgagtcagtctgtgccgtatgtgattacaatcgt
cccggaaagacgtgtgatcgccgcatgacatgggcgtggcgaggagaatatttccctgcc
cagcgcgacgagtacaacatggttcgacatgcattaaatcaggaacagtttcctgcgaag
cgtcccggcggacctcaacgacgctttaacgagttgtctccagctgaacagagcgctttg
ctacataagcgtcttggtgattactctcgcaaggtgtacaagaaaacaaaagagacacgt
attgtgcagcgcgagactataatttgccaacgcgaaaaccctttttacgttgatacggtg
cggcgcttccgtgatcgtcgttacgaatacaagggtctgcacaaaacgtggaagaaaaat
ctagatggccttggctctaacggggccgtcgctgaagtcgaggaggcgaagaagatgatt
gttatctatgattcccttcaactagcccacaagtgcattctgaattctttctatgggtac
gtcatgcgaaagggcgctcgttggcattcgatggagatggctggaataacgtgcctgacc
ggagcgacgatcatccagatggctcgtcagctcgtcgaacaaattggtcgtcccttggaa
cttgatactgacggtatctggtgtatgcttcccgaagttttccccgagaacttcaagttt
caactagcgaatgggaagaccattggcttctcgtacccatgcacaatgcttaatcatctc
gtccatgcaaaattcacgaaccaccaatatcatgacctggatccagaaactagtcagtac
aaggtccatagcgagaactcgatcttcttcgaattagatggtccgtacaaggcaatgatc
ctgccgtcttcaaaagaggaggacaaattgctgaagaaacgatacgctgtattcaatgat
gatgggtctctggcggagctgaaaggatttgaagtcaagcgacgcggggagttacagctc
atcaagatctttcagtctcagatcttcgagaagtttttgctgggatcgacaactcaagaa
tgctatgcagctgtcgccgaaatagcggatcgctggctggacgtcctgtacagcagagca
gaaagcttgagtgatgaagagcttgtcgagctgatcgcggagaaccggagtatgtcaaga
actctcgccgagtacgctggccagaaatcaacatcaatcagcacggcaaggcgtcttgcg
gagtttttaggtgaccagatggtcaaggataaaggcctggcttgcaagttcgtaatttcg
gcgaaaccgataggcgctccagtgaccgaacgtgcggttcctattgccatcttctctgcc
gaagagagcgtgaagaggacgtaccttcgcaaatggctaaaggataatagtctggcaagt
ttcgacttgcgcgccatactggattgggattattatattgagcgtttaggttccgtcatc
cagaaacttatcaccatcccagccgccatgcaaaaggttcctaatccggtgcctcgcata
cgccatccggactggcttcaccgacgtgtcgttgctctcgacgacaaatttaagcaacac
aaggtaacggactttttcaagaagtcgttagccgatgaatcgcacactcagccccagaac
ctgcccgacttcgaggatctgacccttgaagatggtgatcgtccatcctcagaccgtatt
gccattaccaagaaagcctcccgcaagatcaccgagaacaatgatctacctgtatctgag
acccggcttccaaacccttacaagaactatccgaagtggctaaaagctgtgaagaaacgc
tggagagcgcaattagaggctcgcgataatgaagatccttcaatggccgtgccatcgatg
ttccgaggagtgaggagtgtaattactcgccactgggacatcgtgcagattaggtctatt
agtcgtggccgcttcaccatgtggttgtgcgtgaacgccgagctgataccggtgacatta
cggattccccgtgaattctatctaaacttcaaagcaccgcccggaagggatgaatttgag
gagcactatatacgcgatcgagtcatccggacccttcctcgtgatcgtccatgtttccat
ctctacaagtactccatgtccgaggaaacattcctaaatggtgaaagccatttcacgaat
gagatcaacaatccgaacgttgatggcgcctatgagcttcaggtccccttagttgtccgt
gctcttgtaaagcttgggactacctgcattaccgaccaaaaaggtctcacacttaacaga
gcccgagataatggcgttgacctctggcaaatggaccgctcgatgccttccccgttgagg
aaaccttacctcgacagtggcaagcctcttaaatacctctttctatatcacgcatacacc
gcttctgcgcctgttcatgtgtatgctttattccttcctaatgggacggtgaaattgcac
gtggtggactcagcgactcgacggcagctcatcccacgatttgagaacgcctacgaagat
cttttagcgaagaaacgctccgacctcagtaaattctcgacgtatgtctaccccgacgca
cttagatcatcgaccgattatcacagcaatgagacgactgctttgaaggccatatcacga
gagctcggagctctggagaagaagtcctttaccatcgtattgtcatctgcaaaggacttc
acctactttagcagttcagtgccgaagctaaacagattcccggttctgcgcatgccttcg
acaaaagctagccatattctcgacattttcccgtggcaaagcgcaattgcaaagaagatg
ttcttacgctacttctctcttgcgccatggcttcaaagaaccatcgcccaggcggcttac
tacgatattcctgttggacatatcgaagatgaccagcctctcttcttctgcgatatcgag
ttagcccgccgactatcagctcaagacatggtactgtggtggtcagctggagaaaagcca
gatcttggtggtttcgagaatgatatgcctcccgctgaagagctcacgaaccccgaattt
ctctctccaggcctttactcgaaagtttgcctttccatacaggttggaaatctcgcgata
gattcggtactgcaatcggctcttgtcaatgagctggaaggtagcggagggaccaccgct
tttgactcaacgtcgcacactctggatgactattccactggggatgcgcaaccaaatgtc
acgttaggtgactcaaatttgtctccccaaatgtttgcaatcattaagcaaatggtccgg
gcttggttgctcgataaggcgcgtgattctaacagtccggtgtcggtgactcttgatcac
ttctggcgctgggtgagctcgagctctgccatgatgtatgagccaagcgtccagcgtttt
atacacgggctcatgcggaagacatttatccaactattggccgaattcaagcgtctcggt
tcaaatgtagtttacgctgatttctcccgaattcttcttgtcacatcgaaacctccggga
acagctcacgcatacgcaacatacatcacgacggcggtaacatctcacgacttgtttaag
cacatatatctgcgaacggagcgtttctacgatttcctactatatatggatcctgcgaac
tatggggccgtcgtttgtgaggacccgctcgctatcgaaccgccgaagcagatagctatt
tcgtcgacctggaacattaacaagttcctgcctcccgcagtacaaggtcatttccgaacc
gtagtgcgttacttcatagcacaaatggcaaaaattaggcgtgaggttgagcagaacacc
cgaacacctcttcgtgttgtgcaaaacttggggccagatgtgacccaacgggatacaggg
aaaataaaggaaatcgacgaatcgaaagtcttcattgcgcaaaagttgactcgtcggatg
ctccaagtcgtctcagtaattcaagacgaacacaaaaggtccataatggacgaaggagaa
tccccagagtacgccttcccggttctaccgggatcctacctgcacatgaccgaacccact
ctcgaatttatcaagttttcctgcgccgtcttcagtctcgcacaagattatcaaattgag
attgggttgatgaagcgcaatctcctggaactcgtcggagtgcgagagttctccgaccaa
gcactctttcgcaatccttgcgatccgctcaagttgtccatggtcacatgttgttactgc
gatcatatccgggatttcgatttctgtcgggatgatgacctacttcccacttcgcttgaa
caagcaaagtggtattgcccagaatgcgacggcgaatacgatagaaccgctattgaattt
gcgttaatccagcatttacatcgtcttgagcgtaacttcgttcaacaggacctccgttgt
gctcgatgcaagcagattcaatctgacaacgtttctcgtcattgtgaatgttctggaaat
tatcaacttacaactagtaaagcggacgtccgacgaaagttgcgtaccattatcaacgtc
gccatcacacataatttgacgaggttgaaggaatgtgcacaactaatgtatggtaactgg
taa

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