Fomitiporia mediterranea: FOMMEDRAFT_138994 Help Entry FOMMEDRAFT_138994 CDS       T03132                                  Name (RefSeq) WD40 repeat-like protein   KO K14005   protein transport protein SEC31 Organism fme  Fomitiporia mediterranea Pathway fme04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:fme00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     FOMMEDRAFT_138994  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:fme04131]     FOMMEDRAFT_138994   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:fme02044]     FOMMEDRAFT_138994 Membrane trafficking [BR:fme04131]  Endoplasmic reticulum (ER) - Golgi transport   Forward pathways    Coat protein complex II (COP-II)     FOMMEDRAFT_138994 Secretion system [BR:fme02044]  Sec (secretion) system   Eukaryotic Sec-SRP protein    FOMMEDRAFT_138994 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Prp19 WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 SRA1 Beta-prop_EML EIF3I WDR55 Beta-prop_DCAF4 Beta-prop_IFT140_1st TPR_Sec16 SPESP1 Motif Other DBs NCBI-GeneID:  18672325 NCBI-ProteinID:  XP_007263731 JGI:  Fomme1_138994 LinkDB All DBs Position Unknown AA seq 1421 aa AA seqDB search MKLKEIHRTATFAWSPLPEVPLLVSGTVAGALDESFSNDSQLEIWAPDFMDKEEYDLGGI AQNGPKAFISTTSRFNRLAWGLPNTGRAKGVIAAGMENGELGLWDPEKILGTSDAGESLI LRNTTHQGSVRGLDFNPIQTNLLSSGATNGEIYIWDLKDPSKPYSPGTRSSKLDEITSLA WNRQVQYVLASSSSTGYTVVWDLRNKREVVALAYGGATQGLNIMGAAGRKGMSDVAWHPD NATRLVTSSEDDASPVVMVWDLRNARAPEKILTGHERGILSLSWCREDADLLLSCGKDNR ALCWNPQTAEVIGELPYADNWAFQVQWCPRNPDLSATAYFDGTIGIHSIQTTNDSADSQA PVPTPKADGSDVFDVPGFSRTTQPTLSLKQPPKWLRRPVSSSFGYGGKLVSVSNLPSAQG KHQSGVVHLRKVVTEPDIIARVKELKGAADGQDLSEFAQKKAADAEARKVHDTASWKALT SLFKTDSREELVTLLGFSKADIAARVAEAVERIKTTATPTQAPTEELDHEHTKPHEPVVS FAEPEPEPEPEQEPEHTPSEQSTSATSDHTDVAGAVDGESTTTAPSLFGDDIGTPQTDAE ADFFSTMGTIRSAVPERVQIPHTNYAQDSSVAATVGSRPSSAASETLKNNTFHIYPSEES EIDRLITKSLVMGDFESAVTLCLSAERFADAILLAVKGGPELLQRTQQIYFEKRTINLPY LRLFQSIVTEDLDDIVQNADLQEWREIFVVLCTFAKPDEFANLAEQLGQRLEFHANILKN AGSASADELRKNATLTYLAAGRLEKVVNIWIEEMAEEENYLLAGADERSSSRYSAHAHAL QTFMEKVTIFRNATSYSDADLKVVPDPAAAYKLTALYERYYEYADLLATQGLLEEAISFL KLIPSDYQSTSGTGLDFKMARERILAGSEHRKKVAARTQALPSTAAATLPSQPGPYGYQQ SSYAAQPVPAISSSTSRGPTYAPYNINGSAVPTQVNNPYAPPAATAPMQTTYQPSVPVQQ FQSAYAPSQLSAPSAPVSTAPPPSGPPPPPKKRDNSGWNDAPILDRRTPVSNVPGGKAQA ITSPFPNATPPQSVPGSPAMHGPPQGLPPPPRPGSVNRGQSQVMPGPPPPGQRPPGPHGG HIPPPGRTFSPPQQVPSIPGHIPGQQAGPPPPRGPPQFAPPGRVLSPPQAQVQPSHESTQ SPYAPPVPRGPSGPPAGPPAVTKPYARDTPPPGWSGPNVPVPQQTGAQQQEQPTGPYAPP PSLARQTLPPGGAAPAPQLSTAPPPQGPPSSSAGPPRTPAAKPGPPQPKYPPGDRSHIPE SSRRSYEIFLQALERFKQTSAPPQKRMVDDTERRLNLLFDALNCETLSPPVIERLNVLSE TMAAGDRQHSLALHAEMLAQCSRTDDIGLWMSAIKQLIMRV NT seq 4266 nt NT seq  +upstreamnt  +downstreamnt atgaaactcaaagaaattcacaggacagcgacgttcgcctggtcgccgttgcccgaggtc cctctgctggtctctgggactgttgctggtgcactcgacgagtccttcagcaatgacagc cagcttgagatatgggctccggactttatggacaaggaggaatatgatctaggcggtatt gctcagaatgggccaaaggcattcatttcaaccacgtcaaggtttaatcgactcgcctgg ggtttgcccaataccggtcgtgccaaaggtgtcatagctgctggcatggagaatggcgag ctgggcttgtgggacccggaaaaaatacttggaacatctgatgccggagagtccctcatc ctgcgcaacaccactcatcaaggatcagtacgcggactcgactttaatcctatccagacc aatttgctttcgtctggggccacaaatggggaaatttatatatgggacttgaaagatccg agtaagccgtattcaccaggcactcgatcctcaaagctcgatgagatcacgtctttggca tggaacagacaagtccaatatgtcctcgcatcatctagcagcacaggctacacggttgtg tgggatctgaggaacaaacgcgaggttgtagctcttgcatacggtggtgctacacaagga ctcaacatcatgggagccgcaggcagaaagggtatgagtgacgtcgcatggcatcccgat aatgcgaccaggctggtgacttcatcagaggacgacgcatctccagttgtcatggtctgg gacttgagaaatgcgcgtgctccggaaaaaatactgacgggtcatgagagaggaatcttg tccctctcttggtgcagagaagacgctgatctgctactgtcctgtggtaaagacaaccgt gccctgtgctggaatccgcaaacagctgaggtcatcggtgaacttccatacgccgataat tgggctttccaggtccagtggtgtcctcgaaaccctgatctttcagcaaccgcttacttc gatggaactattggtattcactcgattcagacgacgaatgattctgcggattcgcaagca cccgtcccaacacctaaggcagatgggtctgacgtttttgacgttccgggcttttctcgc acgacacaaccaaccttgtctttgaagcagccaccgaagtggctgcgtcggccagtatcg agctcctttggttatggtggtaaactggtgtctgtatcaaaccttccatcggctcagggc aaacatcaaagcggtgttgtgcatctacgaaaagttgttactgagccggacattattgct cgcgtcaaggagcttaagggagccgcagatgggcaagacctcagtgaatttgctcagaag aaagccgccgatgcagaggcacggaaggtccacgatactgcaagttggaaggctctcacg agtttattcaagacagattcaagggaagagcttgttaccttactagggttttccaaggca gacattgctgctagggtcgctgaggcagtcgagagaatcaaaacgacagctacgccgact caagcacctacggaggagttggatcacgagcatacaaagcctcatgagccagtcgtatca tttgccgagcctgaaccagagcctgaacctgaacaggagccagagcacacaccgtctgaa cagagcacgagtgcgacatcggatcacacagatgttgctggtgctgttgatggggaatcg accacgacggctccgtcgctattcggcgatgacattggaactcctcaaacagatgccgaa gcagatttcttcagtacgatgggtaccatccgtagtgctgtccctgagcgtgtccagatt ccacacaccaactacgcccaagactcgtctgttgctgcgactgtcggttctcgtccgtct tctgctgcatccgagactttgaagaacaacacattccacatttatccttctgaagagtcc gaaatagacaggcttatcaccaagtcgctggtaatgggtgattttgaatcagcagtgacg ctctgcctgtcagcggagcgctttgcagatgcaattcttttggctgtaaagggtggtcct gagcttcttcagcgcactcaacaaatatattttgagaagcgtacgattaatctgccatac ctccgtttgttccaatcgattgtcacagaggacttggacgacattgtccagaatgctgat ctgcaggaatggcgagaaatcttcgttgtgctttgtaccttcgcaaaacccgacgagttc gcgaacctcgcggaacagctcggccagcgtctcgagttccacgcaaacatccttaaaaat gcaggatcagcatctgcggatgaactcaggaagaacgctactctgacatatctcgccgca ggccggcttgagaaagtagtaaacatctggattgaagaaatggccgaggaagaaaactac cttttggctggcgccgacgagaggagcagctcacgctattctgcacacgcgcatgcattg cagaccttcatggaaaaagtcacaatattccgtaatgctacgagctattcagatgcagac ttgaaggtggtgccagatcctgcagcggcttacaagttgacggcactctatgaacggtac tacgaatacgctgatttactggcaacgcagggtctattggaggaagcgatcagcttctta aaacttattccttcagactatcagagcacaagcggtacgggtcttgatttcaagatggcg cgtgagcgcattcttgccggttctgagcatagaaagaaagttgccgctcgaactcaggca ctaccatcgactgcagcagctacattaccatcgcagcctggcccatatgggtaccagcag tcgtcatacgcagcgcaaccagttcccgcaatttcttcatccacgagtaggggtccgaca tatgcaccatataatataaacggatcagcagtgccaacccaagtaaacaatccttatgct cctccggctgcgacagccccaatgcagactacctaccagccttcggtgccagtgcaacag ttccaaagcgcatatgctccatcacaactgtctgccccgtccgcacctgtttcgaccgcg cctcctcctagtggcccaccgccgcctccaaagaaacgagataattctggatggaacgat gcaccaattctagatcgtcggacaccagtttcaaatgtgccgggaggaaaggcgcaagca attacttcacccttcccgaatgccactccacctcagtctgtacctggttcacccgccatg catggtcctccgcagggactcccacctccaccacgaccgggaagtgtcaatagaggccaa tcacaagttatgcctggtccaccacctccaggtcaacgacctcctggacctcatggcggt catatccctcccccaggcaggaccttctcaccaccacagcaggtcccttctattccaggt catattccaggtcaacaggcaggtcctccaccacctcgaggtccgcctcagtttgcaccc cctggccgtgtgctctcgccaccgcaggcgcaagtgcaaccgagccatgaatctacacaa tcgccttatgcccctccagtgcctcgtgggccttcaggacctccagctggcccgcctgct gtaacgaaaccatatgcccgagacactcctcctcctggttggtccggtcctaatgtgcca gtccctcagcaaacaggtgcacaacaacaagaacaacctactggaccatacgcaccacca ccttcgttggcaagacagactttacctcctggtggtgcggctccggcaccgcagctttca actgcacctcctccacaagggcccccgagtagctcggcaggaccgcctcgtaccccggct gcgaagcccggaccgccgcaacccaaataccctcctggtgatcgttcgcatattccggag tcgtcgagacgctcgtacgagatattcttgcaggctcttgagcgttttaaacagactagc gcgccccctcaaaaacgtatggtcgatgacactgagcgtcgactgaacttactgtttgat gctctcaattgcgagactctttcacccccagttatagaacggctcaacgttctctcagaa acaatggccgctggggatcgtcagcactcccttgcacttcatgcggaaatgctagcccag tgttctcgcacagatgacattgggctctggatgtccgctatcaaacagctcatcatgcgc gtataa

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