Fomitiporia mediterranea: FOMMEDRAFT_139111
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Entry
FOMMEDRAFT_139111 CDS
T03132
Name
(RefSeq) Piwi-domain-containing protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_139111
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_139111
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
FOMMEDRAFT_139111
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
FOMMEDRAFT_139111
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
FOMMEDRAFT_139111
microRNA pathway
RISC loading complex
FOMMEDRAFT_139111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoMid
ArgoL2
ArgoL1
Motif
Other DBs
NCBI-GeneID:
18672347
NCBI-ProteinID:
XP_007263906
JGI:
Fomme1_139111
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MSPPKDPFSHYDVVFSPAVNNARLATEIIHRLQNHTAPNVFSRVACAFDGKKNLYVLRQI
LFPEGSMTFKVYMSDRSDPQSKIFNVKLTKVADITPSDLARILQGEGAGMPIITTPLQAL
NVLVQQAAALRIPVHTKQKFFDSSGHQSFGGFEIWRGFFAFVQTLFTIISRTTDSTLPRS
VRPTLGRLLLNMDMATAVMYQRGDLIAFICAYLRIPDSRSLDGCDENNEAWPRMKSVLKG
LQVLLQHTKRLRTIRSIVAKAGEYEFNLANGQQMTVMEYFNNKYHYNLRYPRMPGVVTRK
DEVIPFELCHIKEGQFFRKKTSPELMAQIMNFSKKKPNERLEILRRGMEQLQFGSSTFTQ
QAGLRVSPQPMSISGRLLNPPVMMYGGGSKLSPNSGSWNMVGRRLTEPKDVENWGVMSFA
RIELAAIQTFVTALANAMSAVGMRLRDFYPPIRKDSVYKAGEALNEFRMAAVKATGKPPT
LLLIILPENAAPLKKTVKQFGDIMHGVVTQCVRVDKLMRANNQYHNNLVLKINAKLGGVN
SIVDSLSFRQLSDGRTMVVGLDVTHPGPGVLRPSVAALVSSYDESISKYISRCAVQGPRT
EIIEGLGSLMAYALQMFYRYRKHIHSTVVLPERIIVYRDGVSEGEIHKVVENEVQQIMSI
IDSIYAKEKMPYRAKLTFIVVGKRHHIRFIPKEPRAADKSGNAPAGLFVDQEITSPGVFD
FYLQSHGGLLGTSRPSHYIVVRDDNGFNADMLADFSYSLCYTYARATRSVSIPAPCYYAD
IACARADYHFDPTLRFDDDTSSTGGEFDLTPWIKGFQNVHKAQEVLMYFM
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctccgaaagatccattctctcattatgacgtagtatttagccctgcagtaaat
aatgcaagactagcgacagaaattattcaccggcttcaaaaccataccgcccccaacgtc
tttagtcgggtggcatgcgcttttgacgggaagaaaaacttatatgttcttcgtcaaatt
ttgtttcccgaaggctccatgacgttcaaagtctatatgagcgatcgttctgatccgcag
tccaagattttcaatgtaaaattgacaaaagttgcagacatcacgcccagcgacttagca
cgtattctgcaaggagaaggggcaggaatgccaattattacgacgcctttacaggcgttg
aatgttctcgtgcagcaagctgccgcactgcgtattccagtccatacgaagcagaagttc
ttcgacagctccggtcatcagtcatttggaggttttgagatttggcggggcttcttcgcg
tttgtccagacactctttactattatttctcgtacaactgacagcacattgcctagatcg
gtccggccaactcttggcagattgctattgaacatggacatggcgactgctgtcatgtac
caacgtggggatctcattgcgttcatatgcgcttacctccgtattcctgactctcgctct
ctggatggatgcgatgaaaacaatgaggcatggccacgaatgaaaagtgttttgaaagga
ttacaggtactactccagcacacgaagcgccttaggacgatccgatcgattgttgcgaaa
gcaggagagtatgaattcaaccttgcaaatggacagcagatgactgtgatggaatacttc
aataacaagtaccattacaatttgagataccctcggatgcctggtgtagtcacaaggaaa
gacgaagtcattccctttgagctttgtcacattaaggagggccagtttttcagaaagaaa
acctcgccggagttgatggcgcaaattatgaatttttcgaagaagaagccgaatgaaagg
ttggagatcttgcggcggggaatggagcaactgcaatttggcagctcaacttttacccag
caggcaggtttgagggtgtcgcctcagcccatgtccatttctggacgacttttgaatcct
cctgtgatgatgtacgggggaggctcgaaattgtcgccgaactcaggctcttggaatatg
gtcggccggcggttgacagaaccaaaggacgtagaaaattggggtgtcatgtcatttgcg
agaatcgagttagcggcaatacagacattcgtgactgcactcgcaaatgccatgtcagcc
gttgggatgaggcttcgagacttctacccgccaatcaggaaagattccgtctataaggcc
ggcgaggcactgaacgagttccgcatggcagcagtaaaggctacaggaaagccaccaact
ttgcttctcatcatacttcctgaaaatgctgcaccgttgaagaaaacggtaaaacaattt
ggggacatcatgcatggtgtcgtcacacagtgcgttcgtgtcgacaaactgatgagggct
aacaaccagtatcataataacctagttttgaagataaatgcaaagcttggaggtgtcaat
tctatcgttgattctctgtcgtttaggcagttatcggacggcagaactatggtcgttggt
ttggatgtcactcatccgggaccaggggtgttacgtccctcagttgctgctttggtttca
tcgtatgatgaaagtatctcgaagtatatctccagatgtgcagtccaaggtccacgaacc
gagattatcgagggcttaggtagcctcatggcttatgcgctgcaaatgttctataggtac
aggaagcacatacattcgactgtggtactcccagagcgcattatcgtctatagggatgga
gtgtcggaaggagaaattcataaggttgtcgaaaatgaggttcaacagatcatgagcatc
attgacagcatatatgcaaaagaaaagatgccataccgcgccaaactaacattcatcgtt
gttggcaagcgacaccatattcggttcatcccgaaagaaccgcgggcggcagacaagagt
ggaaatgcaccagctggcttgtttgtcgatcaagaaattacaagccctggcgttttcgat
ttttacctccagtcgcatggtggtctccttggaacatctcgtccaagccattatattgtc
gtacgagacgacaatggcttcaatgcggacatgcttgcggacttctcttattccctgtgc
tacacatatgcccgtgctacacgctccgtctcaatcccggcaccgtgttactatgccgat
attgcttgtgcgagagcggactatcacttcgatccaacacttcgtttcgatgatgacacc
tcgtcaactggcggggagttcgacctcacgccttggatcaagggcttccagaacgtgcac
aaggcgcaggaggtactgatgtacttcatgtga
DBGET
integrated database retrieval system