Fomitiporia mediterranea: FOMMEDRAFT_139116
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Entry
FOMMEDRAFT_139116 CDS
T03132
Name
(RefSeq) DEAD-domain-containing protein
KO
K03257
translation initiation factor 4A
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_139116
03012 Translation factors [BR:
fme03012
]
FOMMEDRAFT_139116
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fme04147
]
FOMMEDRAFT_139116
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
FOMMEDRAFT_139116
mRNA cycle factors
Stress granule specific factors
FOMMEDRAFT_139116
Translation factors [BR:
fme03012
]
Eukaryotic type
Initiation factors
eIF-4
FOMMEDRAFT_139116
Exosome [BR:
fme04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FOMMEDRAFT_139116
Exosomal proteins of bladder cancer cells
FOMMEDRAFT_139116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
UvrD-helicase
Gp6_2nd
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
18672349
NCBI-ProteinID:
XP_007263911
JGI:
Fomme1_139116
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MSRIEEFNDVEANEIESNWDQVVDNFDNMDLKPELLRGIYAYGFERPSAIQQRAIVPVIK
GHDVIAQAQSGTGKTATFSISILQKLDLSIKGTQALILAPTRELAQQIQKVVIALGDYMS
IECHACVGGTDVRQDMATLQAGVQVVVGTPGRVFDMINRRALRTDTIKIFCLDEADEMLS
RGFKDQIYEVFQLLPQDTQVVLLSATMPAEVLEVTKKFMRDPVRILVKRDELTLEGIKQF
YIAVEKEEWKLDTLCDLYETVTITQAVIFCNTRRKVDWLTEKMHQREFTVSAMHGDMEQK
QREVLMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRK
GVAINFVTTEDVRMLRDIEQFYNTQIDEMPLNVADLI
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtattgaagaatttaacgatgtcgaagctaacgagatcgagtccaactgggac
caggtcgtcgacaacttcgacaacatggatttgaagccagaacttttgcgtggtatctac
gcatatggttttgaacggccctctgctatccagcagcgtgctattgttcctgttataaaa
ggccacgatgtcatcgcgcaggcgcagtctggcacggggaaaaccgcgacattctcaatt
tccattctacaaaaactcgacttgtccatcaaaggcacccaagcgctcatcctcgcccct
acacgggagcttgcgcaacaaatccaaaaagtagtcattgcactcggagattatatgagc
attgagtgccatgcctgtgtcggtggaaccgatgtacgtcaagacatggctacgctgcag
gcaggtgtacaggtcgtcgtcggcactcctggccgagtgtttgatatgatcaaccgacgg
gctcttcgcaccgataccattaaaatcttctgtcttgatgaagcggacgagatgctgtcc
cgtggattcaaagatcaaatttatgaagtattccagcttctccctcaggacacacaggtc
gtcctgctttcggcaactatgccggcggaagtgcttgaggtgacgaagaagttcatgcgc
gatccggtccgaatcttagtcaagcgtgatgaacttacgcttgagggtatcaagcaattc
tacatcgctgtcgagaaggaagagtggaagcttgatacgctttgcgatctttatgagacc
gtcacgatcacacaagccgtaatattctgcaacacacgtcggaaggtcgattggcttact
gagaagatgcaccaaagggagttcacggtgtcggcgatgcatggggacatggagcaaaag
cagcgcgaggtgctgatgaaggaattccgctccgggtcctctcgtgtgctgattacgacc
gatttgctggcgcgcggcattgatgtgcagcaggtgtcgctcgtcatcaattatgatctg
ccgacgaaccgggaaaactacattcaccgtattggccgaggaggacggttcggacgcaaa
ggtgttgcgatcaacttcgtgacgaccgaggatgtccggatgctcagggacatagaacag
ttctataatactcagatcgacgagatgcccctcaatgtcgccgacctcatctaa
DBGET
integrated database retrieval system
