Fomitiporia mediterranea: FOMMEDRAFT_140007
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Entry
FOMMEDRAFT_140007 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_140007
04121 Ubiquitin system [BR:
fme04121
]
FOMMEDRAFT_140007
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
90S particles
Other 90S particles
FOMMEDRAFT_140007
Ubiquitin system [BR:
fme04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
FOMMEDRAFT_140007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gly_transf_sug
Caps_synth
Thioredoxin_2
Motif
Other DBs
NCBI-GeneID:
18672452
NCBI-ProteinID:
XP_007265487
JGI:
Fomme1_140007
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MALHAPRPSKGRSSPLPSYSSAVHEKAYLNGRSQSGLFTLFYLPIPGVPGRQLRVPAPIP
PRLYHYTVTRFGRKRGCLILLLCVLSAFWTVFALAKRFGTEEKQWPTPFQSDSTLVFQRE
DLRKIWQWEIASGHYPSSRKIPEQIGLTEEPYNPGLPALKTSLPSRFRPPQKLPITSTRG
MGSKRVYLDFQARPPNVAYPPRPVPGSVIDLDIVMDNCDFSENKYVRDCLEVLRLGAGLD
NGKRVRRGKMDEWKYIYVEQGEPQNYSTTQAAEPTYNLWAAEIPQKQVIEDNPNSGLSKK
YGIDWEPSLILPEPVEYRRTEILPGPCDPDHPRIYHMFWTGPFTDKPYLALLSYLFTQNL
GLHEGASQQEGKVCRPQFWMWINPGPAAAVPNPNARREMFEQLKSNPWASPFLHPRFKDV
IQFKMWNTTEQLDGVPELKEEWRALQETLFNSGGHIIQVPQKKVTTTSTEEERETRGTAD
ADGENATGPPSPSTPVKADNDDMLNRLGSSSSSSYDRLSVILSDMARFVLCHRFGGIYLD
ADTLLLRDWEELWGWKGAFAYRWSRLETYNTAVLHLNKGSALGTFLFRTALRNLLDFHPM
TVSKYAKHSYMEGLLLRLPDALFDSAWLNTEYYQRDRPPQPYFTAFEDFFETPAQDSAAP
QALGFEGFFRGAYSYHFHNFWWKPFDPSRNFPDLGPRFIKGERQARAALKTAPGTTQSDA
DADAEFDEDKVSDDKRDLDWAAVLKRTFEAYIRGERPNMYGEWLQW
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggctctacatgcccccaggccgagcaagggtcgttcgtccccgctcccctcctattca
agtgccgtacacgagaaggcctatctcaacggcaggagtcaatccggccttttcaccctg
ttttacctccccatacctggcgtaccaggacgacaactcagagtccccgcaccaatccct
cccaggttataccactatacagtcacgcgattcggtcgcaaacgtggctgtctcatcctc
ctcctatgcgttctgtctgccttctggacagtgttcgcactcgcaaaacgctttggaacc
gaagagaagcagtggccgacgccgttccaatccgactcaacgcttgtatttcagcgtgaa
gatttgcggaagatatggcaatgggagattgcgagtgggcattatccgagtagtcgaaaa
atcccggagcagattgggctcactgaggagccgtacaaccctgggctgcctgctctcaag
acatcgctcccgtcgcgcttcagaccacctcaaaagcttccaataacgagcactcggggt
atgggttcgaagcgagtttacttggatttccaggctcggcctcccaacgttgcataccca
ccacgacctgttcccgggtctgtaatagatcttgatatagttatggataactgtgatttt
agcgagaataagtatgttcgcgactgtctcgaagtgctgcgcctgggagccggattggat
aatggcaaacgggtgaggcgtggaaagatggatgaatggaagtatatctatgttgagcaa
ggagagccccaaaattattcaactactcaggcggcagaaccaacctataatctctgggct
gcggagatcccacaaaagcaggtcattgaggacaaccccaacagtgggctgagcaaaaaa
tatggcatagattgggagccgtcacttatccttccggaacctgttgaatatcgacgcaca
gagatacttcctgggccatgcgatcctgatcacccacgcatttatcatatgttttggact
ggcccattcactgacaagccgtatcttgcccttttatcatacctctttactcaaaatctg
gggttgcacgaaggcgcaagtcagcaggagggtaaagtgtgcaggcctcagttctggatg
tggatcaatcccgggcccgctgctgctgtccccaatccgaatgcgcgtcgcgagatgttc
gagcagctcaagtcaaatccgtgggcttcgcccttccttcatccgcgtttcaaggacgtg
atccaattcaagatgtggaatacaacggaacagctggacggtgtcccagaactgaaagag
gaatggcgtgcactgcaggaaacattgttcaattccggtggacatattattcaggtacct
cagaaaaaggtcacaaccacttcaacggaggaggaacgtgagactagaggcactgctgat
gcggatggtgagaatgcaactgggcctccatcgccgtctacgccggtcaaagcggataat
gacgacatgcttaaccgtcttggatcatcgtcttcatcctcgtacgatcggttatccgtt
attctgtctgatatggctcgcttcgttctttgtcaccgattcggtggaatttatctcgac
gcggacacattactattgcgtgactgggaggaactttggggctggaagggtgccttcgca
taccgatggtcacggctggagacatacaacaccgctgttctgcatttgaacaaaggctct
gcgctcggtacattcttgttcaggactgcgttaagaaacttgcttgatttccatccaatg
accgtctcaaagtatgcgaaacattcgtacatggaaggtttactcctccgactgcccgat
gcattgttcgactcggcgtggctgaacacggaatattatcaaagagataggccgccccag
ccttacttcactgcatttgaggacttctttgagacacctgcacaggatagtgcagcccct
caagctttaggatttgagggcttcttccgtggtgcatattcttaccatttccataacttc
tggtggaaaccctttgacccgagccgcaatttcccagaccttggaccccggtttatcaag
ggtgaacgacaagctcgtgcggcgctgaagacggccccaggcacgacccaatcggatgct
gatgctgacgcagagttcgacgaggacaaggtgtcggatgacaaacgggatttggattgg
gcagcagtactcaagcgtacatttgaggcttatattcggggtgaacgaccaaacatgtat
ggagaatggctgcagtggtga
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