Fomitiporia mediterranea: FOMMEDRAFT_140187
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Entry
FOMMEDRAFT_140187 CDS
T03132
Name
(RefSeq) Sm-like ribonucleo protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
fme
Fomitiporia mediterranea
Pathway
fme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOMMEDRAFT_140187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_140187
03032 DNA replication proteins [BR:
fme03032
]
FOMMEDRAFT_140187
Spliceosome [BR:
fme03041
]
Complex A
U1 snRNP components
Sm proteins
FOMMEDRAFT_140187
U2 snRNP components
FOMMEDRAFT_140187
Complex B
U1 snRNP components
FOMMEDRAFT_140187
U4/U6.U5 tri-snRNP components
FOMMEDRAFT_140187
Complex C
U2 snRNP components
FOMMEDRAFT_140187
DNA replication proteins [BR:
fme03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
FOMMEDRAFT_140187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
18672479
NCBI-ProteinID:
XP_007265744
JGI:
Fomme1_140187
LinkDB
All DBs
Position
Unknown
AA seq
112 aa
AA seq
DB search
MASTLAQVPKSELNEAEIRQLEEQEISQGPLSVLLQAVRNHHQVLISLRNNKKLLARVKA
FDRHTNMVLENVKEMWVEVPKGKNKKPVNKDRFISKMFLRGDSVILILRNQA
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaccttagcccaagttccaaaatctgagctcaatgaagccgagattcgacaa
ctcgaagaacaagaaatctctcaaggcccactgtccgtgctactacaggctgttaggaac
catcaccaggtccttatctcgctgaggaataacaagaagctactggctcgcgtgaaagct
tttgacaggcatacaaatatggtattggagaacgtcaaggagatgtgggtcgaagtgccg
aaagggaaaaacaagaaaccagtgaacaaagatcgtttcattagcaaaatgtttttaaga
ggtgattcggtgatattgattctccgaaaccaggcatga
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integrated database retrieval system
